Gene Information

Name : HPAG1_0514 (HPAG1_0514)
Accession : YP_627255.1
Strain : Helicobacter pylori HPAG1
Genome accession: NC_008086
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein L
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 537029 - 537742 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACACTCGTGAAAAATACCATATCTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACAAGCGGTTT
AAAGCAACTGGATAGCACCTACAAAGAAACCAACCAACAAGTGCTCAAAAACCTAGATGAGATTTTTTCAACCACTAGCC
CTAGCGCTAATAATGAAATAGGTCAAGAAGATGCTCTAAACATCAAAAAAGCGGCCATTGCTTTGAGGGGAGATTTAGCG
TTATTGAAAGCCAATTTTGAAGCGAATGAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAAACTTATATGTCTAGCCC
TGAACTTTTATTAACCTATATGAAAATCAATCCCTTAGACCAAAATACTGCTGAGCAACAATGCGGAATATCCGATAAAG
TTTTAGTTCTTTATTGTGAAGGGAAACTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCCCTA
AAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCTTTAATCACTGCTTCACAGACGCTTGTAGAAAGCCTAAAAAATAA
AAATTTCATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTTAAATTATTTAGAGGAATTGGACGCAT
TAGAAAGATCCCTAGAACAAAGTAAGCGACAATACCTACAAGAAAGGCAATCAAGTAAGATCATTGTTAAATGA

Protein sequence :
MKTLVKNTISSFLLLSVLMAEDITSGLKQLDSTYKETNQQVLKNLDEIFSTTSPSANNEIGQEDALNIKKAAIALRGDLA
LLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQNTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSL
KAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cag18 AAR03901.1 Cag18 Virulence cag PAI Protein 4e-103 99
HP0539 BAD14037.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-103 99
cagL AAC44697.1 CagL Virulence cag PAI Protein 1e-103 99
HP0539 NP_207335.1 cag pathogenicity island protein (cag18) Virulence cag PAI Protein 2e-103 99
cag18 AAR03873.1 Cag18 Virulence cag PAI Protein 1e-103 99
HP0539 BAD13982.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-103 99
cag18 AAR03931.1 Cag18 Virulence cag PAI Protein 6e-103 99
cagL YP_003728725.1 cag pathogenicity island protein L Virulence cag PAI Protein 1e-102 98
cagL YP_005775739.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-102 98
cag18 AAR03962.1 Cag18 Virulence cag PAI Protein 2e-102 98
cagL AGC69801.1 cag pathogenicity island protein L Virulence cag PAI Protein 9e-103 98
HP0539 BAD13872.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-103 98
cagL NP_223205.1 cag island protein Virulence cag PAI Protein 9e-102 98
HP0539 BAD13818.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-101 97
HP0539 BAD14010.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-101 97
HP0539 BAD13791.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-102 97
HP0539 BAD13845.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-101 97
cagL YP_005774532.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
cagL YP_005777280.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
cagL YP_005779054.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-101 97
HP0539 BAD13955.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-101 97
HP0539 BAD14064.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-100 96
HP0539 BAD13900.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-101 96
HP0539 BAD13927.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-101 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPAG1_0514 YP_627255.1 cag pathogenicity island protein L VFG0298 Protein 8e-104 99