Gene Information

Name : HPAG1_0511 (HPAG1_0511)
Accession : YP_627252.1
Strain : Helicobacter pylori HPAG1
Genome accession: NC_008086
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein Q
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 533301 - 533681 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCCTACTAAAACACGCATTAGAGATCCGAACAAGCAAGAACTTACACAACCAAAAATAAAAGGACTGATCATGGG
AAAAATTTTAGCTTCTTTGTTGGGTGGCGGAACAAATCTTTTTACAGGTTTATCCAGTGATTTGTTTTCTATGATATTAA
ATTTTTTGTTCTTTCTGATGTTAATGATGGGACTTAATGAAGCATTAGGGAAAAAATTTAACTTGCCTATGGACAATATC
AAGAATTTTATGGCAGAAGTGCTGAAGAATGGATTCGATAGTATCAAAAACATGGGATCTGCTTTGGTTGGTAATGGTTT
TGGTAGCAGCAAATCAGACAAAACCGCTAATAAAATGAGTGTCTCTCAAGTAAGACTGTAG

Protein sequence : 
MLPTKTRIRDPNKQELTQPKIKGLIMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEALGKKFNLPMDNI
KNFMAEVLKNGFDSIKNMGSALVGNGFGSSKSDKTANKMSVSQVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-32 100
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 4e-32 100
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 4e-32 100
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 4e-32 100
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-31 99
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 1e-31 99
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 6e-31 98
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 2e-31 98
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 3e-31 97
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 8e-30 96
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-27 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPAG1_0511 YP_627252.1 cag pathogenicity island protein Q VFG0294 Protein 5e-32 98