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Name : HPAG1_0502 (HPAG1_0502) Accession : YP_627243.1 Strain : Helicobacter pylori HPAG1 Genome accession: NC_008086 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Y Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2948 EC number : - Position : 520227 - 524114 bp Length : 3888 bp Strand : - Note : - DNA sequence : TTGAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAAAGAGCGTTAAGGCTTATTTGGATTGCGTTTCAAA AGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGAAAACTTTTAGAAGAAGCCAAAG AAAGTCTTAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACG CCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAAGCTTATTTAGATTGCGTATCTCAAGCCAAAAC TGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTA AGGCTTACTTAGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAACTACTCACCCCTGAAGCG AAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGA TCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCCTGAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGA ATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGC GTTAAAGCTTATTTAGATTGCGTATCTCAAGCCAAAAATGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGA AGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAAGCTTACTTAGATTGCGTATCTCAAGCCAAAAACGAAGCTG AGAAAAAAGAATGCGAGAAACTACTCACCCCTGAAGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAAC GCTAAAACCGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAAAGAG CGTTAAGGCTTATTTGGATTGCGTTTCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCTG AAGCGAGAAAACTTTTAGAAGAAGCCAAAGAAAGTCTTAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGAATGAAGAA GAAAGGAGAGCTTGCGAGAAATTGCTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAAGC TTATTTAGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAA AAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTACTTAGATTGCGTATCTCAAGCCAAAACCGAAGCTGATAAAAAA GAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAAC CGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAAAGAGCGTTAAGG CTTATTTGGATTGCGTTTCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGA AAACTTTTAGAAGAAGCCAAAGAGAGCCTGAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAA AGAATGCGAGAAATTGCTCACGCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGG ACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAGGAAATTTTTA GCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGA CTTACAGGAAAATGTTTTAGCTAAAGAGAGCCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAA GGAGAGCTTGCGAGAAACTACTCACCCCTGAAGCGAGAAAACTTTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTAT TTGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAGGAAATT TTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGATCAAAGATTGCTTGAAAAACGCCGATCCTAACGACAGAGCGGCTA TCATGAAATGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCTAGAGAAAAGGCTGTCTTGGAT TGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAA TAAAAGGACACAAAACAAACAAAATCAATTGAGTAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGGATAATTTAG ATGACCCTACTGATCAAGAGGCCATAGAGCAATGTTTAGAAGGCTTGAGCGATAGTGAAAGGGCACTAATTCTAGGAATC AAACGACAAGCTGATGAAGTGGATCTGATTTATAGCGAACTAAGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGG TTATCCATTGTTACCAATGGATTTCAAAAATGGCGGCGATATTGCCACTATTAACGCCACTAATGTTGATGCGGACAAAA TAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGATATTACCAAGCAATACGAAACAGAAAAAACCATTAAGGAT AAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGGTAGCAATAAAAAAGATGACGATAAAGAAAAAAGTAAAAAATCCAC AGCAGAATCTAAAGTAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAATCGCTCTTA AGAACAAAAAAGAAAAGAATGGGGAATTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGCAGAAAAACAA GATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACACCCCTATTGA AATCACTCTGACTTCTAAAGTAGATGCCACTCTCACAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAATATGA ATGGCACTATGATCTTACTAGATAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACACCCATTATG ACACGCTTAATGATAGTCTTTACTAAAGCCATTACGCCTGATGGTGTGATAATACCTCTAGCAAACGCTCAAGCAGCAGG CATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAACCACTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCG TGGTTAATAGCTTCTTGCAAACTGCGCCTATCATAGCTCTAGATAAACTCATAGGCCTTGGCAAAGGTAGAAGTGAAAGG ACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGTAGTATGCAAAGTTCAGCGCAGATGTCTAATCAAATTCT AGGACAACTGATGAATATCCCCCCAAGTTTTTACAAAAATGAGGGCGATAGTATTAAGATTCTCACAATGGACGATATTG ATTTTAGCGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATCATCAAACAAAGCACCAAAACTTTG TCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATTGA Protein sequence : MKDLPKDLQKKVLAKKSVKAYLDCVSKARNEKEKKECEKLLTPEARKLLEEAKESLKAYKDCVSKARNEEERRACEKLLT PEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEAEKKECEKLLTPEA KKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKES VKAYLDCVSQAKNEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEAEKKECEKLLTPEAKKLLEQQALDCLKN AKTDEERKKCLKDLPKDLQKKVLAKKSVKAYLDCVSKARNEKEKKECEKLLTPEARKLLEEAKESLKAYKDCVSKARNEE ERRACEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKTEADKK ECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKKSVKAYLDCVSKARNEKEKKECEKLLTPEAR KLLEEAKESLKAYKDCVSKARNEKEKKECEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFL AKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAY LDCVSKARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLD CLKTARTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGI KRQADEVDLIYSELRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKD KNLEAKLAKALGSNKKDDDKEKSKKSTAESKVESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKAEKQ DETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIM TRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTL SREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | YP_003728737.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 86 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| HP0527 | BAD13779.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | YP_005779063.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 82 |
| cag-Y | AAF80198.1 | Cag-Y | Virulence | cag PAI | Protein | 0.0 | 79 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPAG1_0502 | YP_627243.1 | cag pathogenicity island protein Y | VFG0287 | Protein | 0.0 | 85 |
