|
Name : hslU (HPAG1_0490) Accession : YP_627231.1 Strain : Helicobacter pylori HPAG1 Genome accession: NC_008086 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : 3.4.21.92 Position : 508542 - 509873 bp Length : 1332 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTAAATTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAATATATCATTGGGCAAAAGGAAGCTAAAAA GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATCACGCCTAAAA ACATTTTAATGATTGGCTCTACTGGCGTGGGTAAAACGGAAATCGCAAGAAGAATAGCAAAAATCATGGAACTCCCCTTT GTGAAAGTGGAGGCGAGCAAGTACACAGAAGTGGGTTTTGTGGGGCGTGATGTGGAGTCTATGGTGAGGGATTTGGTTAA TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAATTAAAAGACAAGATTGAAGAGGCGGTTGTAGAAAAAATCG CTAAAAAACTCCTACCCCCTTTGCCTAATGGCGTGAGCGAAGAAAAAAAACAAGAATACGCTAACAGCCTTTTAAAGATG CAACAAAGAATCGTGCAAGGCGAGTTGGATAGTAGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC CAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAACTTGATTAAGGTTTTCCATAAAGAACAGGATAAAGTCAAAAAAA CTTTAAGCGTTAAAGAGGCTAAAGAAGCCTTAAAAGCAGAAATTAGCGACACGCTTTTAGACAGCGAAGCCATTAAAATG GAAGGCTTGAAGCGCGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTCAGCTCTAAAGAAGG AAGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT ATGGCTCTATTAAAACAGAGCATATTCTATTCATTGCAGCCGGGGCTTTTCATCTTTCTAAGCCAAGCGATCTCATTCCT GAATTGCAAGGCCGTTTCCCTTTAAGGGTGGAGTTAGAAAATTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC TAAAACTTCTATCATTAAACAATACCAAGCCCTTTTACAAGTGGAAGGCGTAGGAATTGCGTTTGAAGACGATGCGATCA AAGAGTTAGCCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAA AAAGTGCTAGAAGACATTAGTTTTGAAGCGGAGGATTATTTGGGGCAAAAGGTTACTATCACTAAAGAATTGGTTCAATC AAAGCTAGAGGATTTAGTGGCTGATGAAAATTTAGTGAAGTATATTTTATAA Protein sequence : MSKLNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMELPF VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVVEKIAKKLLPPLPNGVSEEKKQEYANSLLKM QQRIVQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDSEAIKM EGLKRAESSGVIFIDEIDKIAVSSKEGSRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLSKPSDLIP ELQGRFPLRVELENLTEEIMYMILTQTKTSIIKQYQALLQVEGVGIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIE KVLEDISFEAEDYLGQKVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 99 |
