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Name : HPAG1_0359 (HPAG1_0359) Accession : YP_627100.1 Strain : Helicobacter pylori HPAG1 Genome accession: NC_008086 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 371207 - 373135 bp Length : 1929 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : TTGATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAATGTGCTTCGCTTTTTGTGCGCGGACATGAT AGATAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTGCACCTAAACC TAAACCCCACTAACCCTAAATGGCTCAACAGAGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGT TTGTTGCATTTGTGGGGCTTTGATTTGAGCCTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACA CCCCGAATTGCACCACACCGAAGGCATTGAGATCACGACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTA GCATGGCGAGTCGATACGCTCAAAACCTTTTAGACAAAAAAGCCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGG GATTTGCAAGAAGGCATTAGCTATGAGAGCGCTTCTTTAGCCGGGCACTTTCGCCTTGATAACCTCATCGTGATTTATGA CAGCAACCAGATCAGCATTGAAGGCGCTATTGATATTAGTTTTAGCGAACAGGTTAAAACGCGTTTTTTAGCGCAAAATT GGGAAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCATAACGCTTTAGAAGAAGCCAAAAAATCCCATAAACCC ACGCTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTGTTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCTTT AAATAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAACCCTGATGAAAGCTTTATCATTAGCCCAAAAAACA AAATGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAGGCCTTATGGGAAAAATCCTTAAGCCCTAAAACAAAA GAAAAAATCCATGCGTTAAAGGATTTTGATTTTAACGCCATCCATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCAC AAGAGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGCTTTTTAGGGGGTAGCGCGGATCTAGCCC CCTCTAACAACACGCAGTTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCC ATGGGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTA CTTGATGCCCAGCATTCGTTTGAGCGCTTTAATGAAACTAAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGCGTGG GCGAAGACGGGGCGACGCACCAGCCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCGCATTTTTACGCTTTCAGGCCC AGCGACGCTTTTGAAAATAAGGCTTGCATGCAAGTAGCGTTAAGTTTGAACGCTCCTAGCGCTCTTATTTTATCGCGCCA GAATTTGCCCGTGCTAGATGAAGTCTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACATGATGCTAAAGATCCCA TTATCACGCTCGTTGCGAGCGGGAGCGAAGTCTCTTTAGCTTTAGAGAGCGCTAAAATGTTAGAGCGAGAAAATATTCCC ACTCAAGTGGTGAGCGCACCATGTTTTGATTTATTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAA AGTCTTAGTCATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGA GCTCAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCGCTCAAGCTAAAAGATTACTC AACGCATGA Protein sequence : MMRLSNADLERLKSMANVLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYS LLHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASRYAQNLLDKKAISHKVYCLCGDG DLQEGISYESASLAGHFRLDNLIVIYDSNQISIEGAIDISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAKKSHKP TLLIAHTIIGKGAVGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKTK EKIHALKDFDFNAIHYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHA MGAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPHFYAFRP SDAFENKACMQVALSLNAPSALILSRQNLPVLDEVSKEQVLKGAYVKHDAKDPIITLVASGSEVSLALESAKMLERENIP TQVVSAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLL NA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-97 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-87 | 41 |
