|
Name : HPAG1_1513 (HPAG1_1513) Accession : YP_628254.1 Strain : Helicobacter pylori HPAG1 Genome accession: NC_008086 Putative virulence/resistance : Unknown Product : putative outer membrane lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1577041 - 1577856 bp Length : 816 bp Strand : + Note : - DNA sequence : ATGAATGCATTCAAGCGTATTATTTGCATAACCGCTATCGTTTTAGGTTTTTTTAATCTCTTAGACGCCAAACACCACAA AGAAAAAAAAGAAGACCACAAAATCACTCGTGAGCTTAAAGTGGGTGCTAACCCTGTGCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAAGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACCGATTATGTGTTGCCTAATTTAGCG CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTGAGATTTTATTCTCAAAAAATCACGGATATTAAAAACCTTAAAA AGGGTTCAGTGATTGCTGTGCCAAATGATCCGGCCAATCAAGGCAGGGCGTTGATTTTACTGCATAAACAAGGGATTATC GCTCTCAAAGATCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAACCCTTACAACATCAAAATTAAGCCTTT AGAAGCCGCGCTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTATGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAGGACTCGCCTTATGCCAATCTGATAGCCGCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAGCGCTGATTGAAGCCTTACAAAGTGAAAAGACCAGGAAATTCATTTTGGATACCTATAAGGGAGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIICITAIVLGFFNLLDAKHHKEKKEDHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGII ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 2e-34 | 41 |
