|
Name : Bcen_3511 (Bcen_3511) Accession : YP_623378.1 Strain : Genome accession: NC_008061 Putative virulence/resistance : Virulence Product : Type III secretion protein HrpO Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 623129 - 623407 bp Length : 279 bp Strand : + Note : TIGRFAM: Type III secretion protein HrpO; PFAM: export protein FliQ, family 3; KEGG: pae:PA1692 probable translocation protein in type III secretion DNA sequence : ATGACGAGCTCGACGATCCTCGACCTGACGCGCCAGGCGCTGATGCTCGTGCTGCTGCTGTCGCTGCCGATCGTGCTGAT CGCGACCGTCACGGGCCTCGTCGTCGCGATCCTGCAGGCCGTCACGCAGGTGCAGGACGCCAACATCGGCATCGCGGTGC GGCTGATCGCCGTGATGGTCGCGCTCGTGCTGCTGTCCGGCTGGCTCGGCGGCGAAGTGCTGCGCTTCGCGCAGCAGGCG CTGGAACGCATGTTCGTTTCTTCCACAGGAGTTCTTTGA Protein sequence : MTSSTILDLTRQALMLVLLLSLPIVLIATVTGLVVAILQAVTQVQDANIGIAVRLIAVMVALVLLSGWLGGEVLRFAQQA LERMFVSSTGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-06 | 49 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 4e-04 | 44 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 4e-04 | 44 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 4e-04 | 44 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 2e-06 | 43 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 2e-04 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcen_3511 | YP_623378.1 | Type III secretion protein HrpO | VFG0187 | Protein | 6e-05 | 51 |
| Bcen_3511 | YP_623378.1 | Type III secretion protein HrpO | VFG0395 | Protein | 6e-07 | 43 |
