Gene Information

Name : Bcen_0007 (Bcen_0007)
Accession : YP_619896.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : lytic transglycosylase, catalytic
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 7488 - 7982 bp
Length : 495 bp
Strand : -
Note : PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_A3245 lytic transglycosylase

DNA sequence :
ATGAACAGACGGTTCGCTTCGATCGCGTTGATCGCCGCCGGCGCGTGGTTCGCCAGCGGCAACGCACGCGCCGACTGTTT
CGACGAAGCGGCCAAATATCAGCAGGTCAATCCGCTGATCCTGCGCGCGATCGCGTGGCAGGAATCGCGCAACCGGCCCG
AGGCGCTGAACAAGAACACGAACGGCTCGGTCGACTACGGCCTGATGCAGATCAATTCGATTCACCTGCCGACGCTGTCG
CGCTACGGGATCGGCCGCGACACGCTGATGGAACCGTGCAAGAACGTGTACATCGCCGCGTGGCATCTCAAGCAGAAGAT
GAACCGCTACGGCAACACGTGGCAGGCGGTCGGCGCCTATCATTCGGAAACGCCGTCGCTGCGCGACAAGTACGCGCGGC
AGATCGCCGGCATCCTGACGCAATGGAAGCTGCTGCCGCCCGCGCAGACCACTCAGGCCGCCCAGGCCGCTCAAGCGCCT
CAAGCCGCTCAGTGA

Protein sequence :
MNRRFASIALIAAGAWFASGNARADCFDEAAKYQQVNPLILRAIAWQESRNRPEALNKNTNGSVDYGLMQINSIHLPTLS
RYGIGRDTLMEPCKNVYIAAWHLKQKMNRYGNTWQAVGAYHSETPSLRDKYARQIAGILTQWKLLPPAQTTQAAQAAQAP
QAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 6e-37 69
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 4e-37 69
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-36 67
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 4e-37 66
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 5e-37 65
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 5e-37 65
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 8e-16 43
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-17 43
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 6e-17 43
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 6e-17 43
unnamed AAL57531.1 unknown Not tested LEE Protein 4e-17 43
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 4e-17 43
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 4e-17 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-16 42
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 2e-16 42
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-16 42
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 2e-16 42
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-16 42
unnamed AAL06358.1 unknown Not tested LEE Protein 2e-17 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 2e-14 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 2e-14 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_0007 YP_619896.1 lytic transglycosylase, catalytic VFG1789 Protein 1e-17 45
Bcen_0007 YP_619896.1 lytic transglycosylase, catalytic VFG0719 Protein 3e-16 43
Bcen_0007 YP_619896.1 lytic transglycosylase, catalytic VFG0823 Protein 6e-17 42
Bcen_0007 YP_619896.1 lytic transglycosylase, catalytic VFG0539 Protein 4e-15 41