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Name : Bcen_0408 (Bcen_0408) Accession : YP_620293.1 Strain : Genome accession: NC_008060 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 450482 - 452365 bp Length : 1884 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_A3984 polysaccharide biosynthesis p DNA sequence : ATGTTGCGATCCAGAGCATCTTGGCTGTCCCTGAGTGCTTTCCTGTTCGACCTGACGGCGGTTGTCGCCGCATGGTTGTT CGCTTATCTCGTTCGTTTCAACGGCAGCGTTCCGCATGATTTCCTGAGCGGCGCGCTGATGGCGCTGACGTGGGCACTGC CCGTCTATGCGCTGATGTTCCGCGGCTTCGGCCTGTATCGCGGGCTGTGGGTGTTCGCCAGCCTGCCCGATCTGATGCGC ATCGCGAAGGCGGTGGCCGGCGGCGGCGTGATCGTGATGATCGGTGCCGTGATGTTCCAGCCGCAGCCGATCATTCCGCG CTCGGTGCTGCTGGTGTCGCCGTTGATGCTGTTCCTGGCAATGGGTGGCGCGCGTGCGCTGTATCGCGCGACGAAGGAGT ACTACCTGTACGGTGGGCTGGTAGGCAAGGGCAAGCCGGTGCTGGTGCTGGGTGCCGGCACGGCCGGCGCGAGCCTCGCG CGCGAACTGTCGCGCTCCGGTGAATGGCGCTTGGTCGGCCTGCTCGACGACGACGTCACGAAACAGGGGCGCGAAATCTA CGGCTACAAGGTGCTGGGCTCGTTCAACGACCTCAAGCACTGGACCGATGCGATGAAGGTCGAATACGCGATCATCGCGA TTCCGTCGGCGTCGGTCGAAACACAGCGTCGCGTCGCGACCCTGTGCGTGCGGGCCGGCGTGAAGGCGATGGTGCTGCCG TCGCTGACCGCGCTGATGCCGGGGCAGGGCTTCCTGTCGCAGGTACGGAACATCGATCTCGAGGATCTGCTCGGCCGCGA CGCGGTGACGATCGATACGCCGCACGTCGAGGCGCTGCTGCGCGGCCGCGTCGTGATGGTGACCGGCGCGGGCGGCTCGA TCGGCTCCGAGCTGTGCCGGCAGATCCTGCGCTTCGCCCCTGCGCAGCTCGTTGCATTCGATCTCTCCGAATACGCGATG TACCGGCTGACCGAGGAATTGCGTGAGCGTTTTCCGGATCTGCCCGTGGTGCCGATCATCGGCGATGCGAAGGATTCGCT GCTGCTCGACCAGGTGATGTCGCGTCACGCGCCGCACATCGTGTTCCATGCGGCCGCCTACAAGCACGTGCCGTTGATGG AAGAGCACAACGCATGGCAGGCGCTGCGCAACAACGTGCTCGGCACCTATCGCGTGGCGCGGGCGGCGATCCGCCACGAC GTGCGTCACTTCGTGTTGATCTCGACCGACAAGGCGGTCAATCCGACCAACGTGATGGGCGCGAGCAAGCGTCTCGCGGA AATGGCCTGCCAGGCGTTGCAGCAGTCGAGCGGGCGTACGCAGTTCGAGACGGTGCGCTTCGGCAACGTGCTCGGCAGCG CGGGCAGCGTGATTCCGAAGTTTCAGCAGCAGATCGCGAAGGGCGGTCCGGTGACGGTCACGCACCCGGAGATCACGCGT TTCTTCATGACGATCCCGGAAGCGTCGCAGCTCGTGCTGCAGGCGTCGAGCATGGGGCATGGCGGCGAGATCTTCATTCT CGATATGGGCGAGCCGGTGAAGATCGTCGATCTCGCGTGCGACCTGATCCGCCTGTACGGTTTCTCGGAAGAACAGATTC GCATCGAGTTCACCGGGCTGCGGCCGGGCGAGAAGCTCTACGAGGAGTTGCTCGCGGATGACGAGGCGACGACGCGCACG CCGCACCCGAAGCTGCGGATCGCACGTGCGCGCGAAGTGCCGGACAATTTCCTCGACGAATTGCTGCCGTGGCTGATGCA GCATCGCGTGCTGTCCGACGACGAGGTACGGCGCGATCTGCGGCGCTGGGTGCCGGAATACCAGACGGCCGTTGCCCCTA TGTTGCAGAGCGTGCCGTCGGTGCGCGTCGTATCGAACGGGTGA Protein sequence : MLRSRASWLSLSAFLFDLTAVVAAWLFAYLVRFNGSVPHDFLSGALMALTWALPVYALMFRGFGLYRGLWVFASLPDLMR IAKAVAGGGVIVMIGAVMFQPQPIIPRSVLLVSPLMLFLAMGGARALYRATKEYYLYGGLVGKGKPVLVLGAGTAGASLA RELSRSGEWRLVGLLDDDVTKQGREIYGYKVLGSFNDLKHWTDAMKVEYAIIAIPSASVETQRRVATLCVRAGVKAMVLP SLTALMPGQGFLSQVRNIDLEDLLGRDAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILRFAPAQLVAFDLSEYAM YRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRHAPHIVFHAAAYKHVPLMEEHNAWQALRNNVLGTYRVARAAIRHD VRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQSSGRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPEITR FFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLACDLIRLYGFSEEQIRIEFTGLRPGEKLYEELLADDEATTRT PHPKLRIARAREVPDNFLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQTAVAPMLQSVPSVRVVSNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-83 | 46 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-83 | 42 |
