Gene Information

Name : Bcen_0295 (Bcen_0295)
Accession : YP_620180.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : lipopolysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3524
EC number : -
Position : 327312 - 328460 bp
Length : 1149 bp
Strand : -
Note : PFAM: lipopolysaccharide biosynthesis; KEGG: bte:BTH_I1337 WcbD

DNA sequence : 
ATGGAAGTTACCGCTCCTTCCGCTGCACACCGAGACTCTCTGGTGCACAAACTAACGAACAAGCTTCGCCGCGCCAGCCC
GCTCTTTATTTGCACCGTGGTCATCCCGACAGTTGTCGCAACGACTTACTATGGGCTGATTGCATCCGACGTCTACATTT
CGGAATCTCGCTTCGTGGTACGGAGCCCCGAACGCCAATCCCAGACCACACTCGGCGCCTTACTCACAAACACCGGCCTG
TCGCGCTCACAGGACGACAGCTATACGGTTGAAGACTATATTCTCTCGCGTGACGCACTGAAGCGACTGAACGAGAAAGT
CAACGTTGCCGGCGGTTACTCAGCATCGACAGTTGACATATTCAGCAGGTTTGGCGGCTTCTCGTTCGACAAGAGCTTTG
AAGCGCTTTACCGCTACTACCAGAACAAGGTAACCGTCCAACTTGACTCGGCATCGTCGATCACGACCCTCACCACGCGC
GCGTTCACGCCGGAGCAAGCATACGCAGCGAACGAGAACCTGATCGAGATGAGCGAGGGTTTGGTGAACCAGCTCAACAA
CCGCGCACGCGAAGACATGATCAAGTTTGCATCGCGTGAAGTCGAGACGGCAGAACAACGCGCCAGAACCGCAGCACTCA
ACCTTTCGGATTACCGTAACAAGAAGGGAGTCATCGATCCCGAACGCCAGTCTGCCCTGCAACTTCAGCAGGTCGCCAAC
CTACAAGATGAAATGGCTTCGGCTACCGTGACGCTCAACCAGGTCAGACAGGCGTCGCGCGACAACCCGCAAATTCCGAT
TCTGGAGAACCGCATCAGTTCGTTACGCGACGAGATTGCAAAAAGAAACAATCAAGTCACTGGCGGCGACCGCTCGCTTG
CCAACAAGGCCGCCGAATACGAGCGCCTCTCTCTCGAAAGAGACTTTGCCGATAAGCAACTTGCGATCGCACTCTCATCT
CTCGAGCAAGCCAGGAACGACGCGATGCGTAAGCAGCTCTACCTCGAACGTGTCGTGCAGCCGTCCAAACCGGATATGGC
ACTCGAACCGCGCCGCCTGAGAAACATTCTTGCGACCTTGATCCTCGGCATTATTGCATGGGGTGTTTTAACTATTCTGA
TTGCCGGCATTCGAGAGCATCGTGACTGA

Protein sequence : 
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVVRSPERQSQTTLGALLTNTGL
SRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDIFSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTR
AFTPEQAYAANENLIEMSEGLVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEYERLSLERDFADKQLAIALSS
LEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATLILGIIAWGVLTILIAGIREHRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-70 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_0295 YP_620180.1 lipopolysaccharide biosynthesis protein VFG2565 Protein 7e-85 50
Bcen_0295 YP_620180.1 lipopolysaccharide biosynthesis protein VFG0256 Protein 1e-70 46
Bcen_0295 YP_620180.1 lipopolysaccharide biosynthesis protein VFG0686 Protein 1e-71 45
Bcen_0295 YP_620180.1 lipopolysaccharide biosynthesis protein VFG0698 Protein 1e-71 45