Gene Information

Name : Bcen_0293 (Bcen_0293)
Accession : YP_620178.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 325314 - 326096 bp
Length : 783 bp
Strand : -
Note : PFAM: ABC transporter; KEGG: bpm:BURPS1710b_3299 capsule polysaccharide export inner-membrane protein

DNA sequence : 
ATGTCGCTTCTTCATCGAGTTCTCCTTGCCTCTAGGATAAGAGAACTCACTTGCCGTTTGGCTACACGATCCGTCTCAGG
TCAACGCCACAATTTCGGCTTTCTGTGGCTCTTTCTCGAGCCGATGATGTTCACGTCGGGGGTCACGATCGTCTGGTCCC
TCGGACACTTCACCCACGGCTCGAATCTGCCCATCGCCGGCTTCGCCGTAACTGGCTACTCGTCACTGCTTGTCTGGCGA
AATTCTGGGAATCGGTGTTCGAAGGCGATTGAACCAAACCTGAGTTTGCTATACCACCGCAACGTCCGGGTGCTCGACGT
CTTCCTGTCACGCCTGATTCTCGAGACAGCAGGCGCGACAGCATCTCTGTCGCTCCTGATCCTTATCTTTACCGCGCTCG
GCTTAGCTACGTTTCCTGCAGACCTACTCACAATGACGACCGGCTGGCTGTTGCAATGCTGGTTCGCATTCGCCATCGGC
CTTACAATCGGTGCGGCATCGGAGCGCTCGGAGGTGTTTGAGCGAGTATGGCACACCGCCACGTACCTGCTCTTCCCGTT
CTCGGGTGCTGTCTTCATGGTCGACTGGCTACCCAAAGCTGTCCACCCGTACATTCTCGTATTGCCAATGGTTCACGGCG
CCGAAATGATCCGGCACGGCTATTTTGGAAACATTGTCCGAACCCATGAAGATCCAATCTATTTCATCGCCGCCAATTCG
GTGCTTACGCTGATCGGAATGATGCTCGTCAGGGACGTCAGCAAGCGTGTGGAGCCCGAATGA

Protein sequence : 
MSLLHRVLLASRIRELTCRLATRSVSGQRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWR
NSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIG
LTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIVRTHEDPIYFIAANS
VLTLIGMMLVRDVSKRVEPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 7e-45 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_0293 YP_620178.1 ABC transporter VFG2564 Protein 3e-63 51
Bcen_0293 YP_620178.1 ABC transporter VFG0257 Protein 3e-45 46
Bcen_0293 YP_620178.1 ABC transporter VFG0685 Protein 9e-41 42
Bcen_0293 YP_620178.1 ABC transporter VFG0697 Protein 9e-41 42