Gene Information

Name : Bcen_0292 (Bcen_0292)
Accession : YP_620177.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 324661 - 325317 bp
Length : 657 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: bte:BTH_I1335 BexA

DNA sequence : 
ATGATCGCGATCAAAGCTGTTACAAAGGTATATCACACCCGCCAAGGCCCGCGCGTCGTTCTTGACCAGATCGACCTGAA
TGTCCAGAGAGGAGAAAAAATCGGCATCCTCGGACGCAATGGCGCAGGAAAATCGACGCTAATCCGGATGATCAGCGGCG
CCGAATTTCCAACCTCTGGCGACATTGAGCGCAATATGACCATTTCATGGCCGCTCGCGTTCGGTGGAGCATTTCAGGGC
AGCCTCACTGGGTACGATAACCTTCGATTCATTTGCCGCATCTACGGCGTGGATTTCACTAAGGTAGCGCCTTACGTGGA
TGATTTTTCCGAACTCGGCATGTACTTGCGGGAACCGGTCAAAAAATACTCGTCGGGGATGCGGGCTCGGCTCGCGTTCG
CAATTTCCTTGGCAGTCGACTTCGATTGCTTCTTGATCGATGAAATTGTAGCCGTTGGTGATGCGCGCTTTCACGCGAAA
TGCCATAACGAATTATTCGAAAAGAGAAAGGATCGCGCCATGATTATCGTTTCCCACGATGCCGGATACATGCGCGAACA
TTGCGATCGGGCCGCCGTACTCGTGTCTGGGAAGTTGCACAATTTTGACACGGTCGACAACGCACTTGATTTCTACTACA
ACGAATCCAATGCTTGA

Protein sequence : 
MIAIKAVTKVYHTRQGPRVVLDQIDLNVQRGEKIGILGRNGAGKSTLIRMISGAEFPTSGDIERNMTISWPLAFGGAFQG
SLTGYDNLRFICRIYGVDFTKVAPYVDDFSELGMYLREPVKKYSSGMRARLAFAISLAVDFDCFLIDEIVAVGDARFHAK
CHNELFEKRKDRAMIIVSHDAGYMREHCDRAAVLVSGKLHNFDTVDNALDFYYNESNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-67 65
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-40 46
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_0292 YP_620177.1 ABC transporter VFG2563 Protein 1e-68 66
Bcen_0292 YP_620177.1 ABC transporter VFG0258 Protein 6e-68 65
Bcen_0292 YP_620177.1 ABC transporter VFG0696 Protein 4e-67 65
Bcen_0292 YP_620177.1 ABC transporter VFG1449 Protein 5e-41 46