Gene Information

Name : Bcen_0287 (Bcen_0287)
Accession : YP_620172.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 315656 - 316885 bp
Length : 1230 bp
Strand : +
Note : PFAM: polysaccharide export protein; KEGG: bte:BTH_I1327 WcbC

DNA sequence :
ATGGCAAGTTGCATTGTGCGACAATTCGAGCCGGTCTATATTTATCGAACGTATCACATGCCGCCTCTGCTCAATCGTGC
CGTACTGCCCGCCCTGATCGTCGGTGTGCTTGCTGGATGTTCCGTTGTTCCCACGTCGGGTCCGAGCACTGCACGTATCA
ATCAAGTTGCGGATTCTTCGAGCAATACAGCCGATGCCGTTGGCATCCAGGTCGTTGATATGACCGATGGTGTCGCGCGC
AAGCTCTACGCGGAGCGCGGACAGACGGATTTTGCTACAGCGCTTGGGGACGTGGCGCAATTTCGTCAGCAACTCGGTGT
AGGCGACTCGATTGAAGTATCGATCTGGGAGGCTCCACCGGCAACCTTGTTTGGTGCACTGCAAGGCGACAGCCGAGGCG
GCCCGAGCAACGCTCGCGTTACTGTTCTTCCGGACCAGACTATCGATGGAAGTGGGATGATCAACGTGCCGTTTGTCGGA
AATGTGAAAGCCGTCGGGCGGACGCCGGTACAGCTGGCAGCTGATATCACTGGGCGCTTGAAGAACATCGCACATAGTCC
GCAGGTCCTCGTGAAGCTGTCGCGCAACGCCACGTCGTACGTTACGGTTGTCGGAGACGTCGTCAACAGCAACCGCATGC
AACTCTCGGCTCGCGGCGAGCGGCTGTTGGACGCTCTTGCAAACGCGGGTGGGGTTCGGCAACCCATTGACAAGATCACC
CTGCAGGTCACGCGCGGCAACGAAGTTGCATCGTTACCGCTACAAACCGTCATTCGCGATCCGAGGCAGAACGTTCCTTT
GCGCGCCGGCGACGTCGTAACGGCATTGTTTCAGCCTTACAGTTTCATGGCGCTCGGTGCGACCGGCAAGAATCAGGAAA
TCAACTTTGAAGCGCAGGGGATTACGCTTGCGCAAGCGCTTGCACGGGCTGGCGGATTGGAGGATTCCCGCTCCGACGCC
AAGGGTGTGTTCGTATTTAGAATGGAAAAGGCGAATGCGCTTACATGGCCCAAGTCGCCGGTTCGTACCACGGTAGACGG
CAAGGTGCCGGTCATTTACCGGCTCAATTTACACGATCCAAATTCATTTTTCGTCTCTCAGAGTTTCATGATGGACAACA
AGGATTTGCTTTACGTTTCGAATGCGCCAATTACTGACATTCAGAAGGTGCTTAATCTGGTATTTTCTGTCGCTTACCCG
GTCGTTACTGGTGTTCAGACATTTAAGTAA

Protein sequence :
MASCIVRQFEPVYIYRTYHMPPLLNRAVLPALIVGVLAGCSVVPTSGPSTARINQVADSSSNTADAVGIQVVDMTDGVAR
KLYAERGQTDFATALGDVAQFRQQLGVGDSIEVSIWEAPPATLFGALQGDSRGGPSNARVTVLPDQTIDGSGMINVPFVG
NVKAVGRTPVQLAADITGRLKNIAHSPQVLVKLSRNATSYVTVVGDVVNSNRMQLSARGERLLDALANAGGVRQPIDKIT
LQVTRGNEVASLPLQTVIRDPRQNVPLRAGDVVTALFQPYSFMALGATGKNQEINFEAQGITLAQALARAGGLEDSRSDA
KGVFVFRMEKANALTWPKSPVRTTVDGKVPVIYRLNLHDPNSFFVSQSFMMDNKDLLYVSNAPITDIQKVLNLVFSVAYP
VVTGVQTFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 6e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_0287 YP_620172.1 polysaccharide export protein VFG2566 Protein 8e-135 72
Bcen_0287 YP_620172.1 polysaccharide export protein VFG0255 Protein 2e-67 41