Gene Information

Name : Bcen_2042 (Bcen_2042)
Accession : YP_621916.1
Strain :
Genome accession: NC_008060
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2254844 - 2255692 bp
Length : 849 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A5980 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCAGACACTGTATAAAAAAACAGTGTTTTGTGCAAGCCCGCAATGCAAAGCGTTGTGCACGAATAACTTCGGAGACAG
CCGCGCCGGCGCGAACGCCCTGCCGGCACCGGTCAGCAACATGCGAATTCTCATCGCCGAAGACGACAGCATACTCGCGG
ACGGCCTCACCCGGTCACTCCGCCAATCGGGCTATGCCGTCGATCACGTGAAGAGCGGCGTCGACGCCGACACCGCGCTG
TCGATGCAGACTTTCGACCTGCTGATCCTCGATCTCGGGCTGCCGAAAATGTCCGGGCTCGACGTGCTCAAGCGCCTGCG
CGCGCGCAATTCCAATCTCCCCGTGCTGATCCTGACCGCCGCCGACAGCGTCGACGAACGCGTGAAGGGGCTCGACCTCG
GCGCCGACGACTACATGGCCAAGCCGTTCGCGCTCAACGAGCTCGAGGCGCGCGTGCGCGCGCTGACCCGGCGCGGCGCC
GGCGGCGGCCCGACCGTCGTGCGCCACGGCTCGCTCGCGTTCGACCAGGTCGGTCGCATCGCGTACGCGAACGATCACGT
GCTCGATCTCTCCGCGCGCGAGCTCGGCCTGCTCGAGGTGCTGCTGCAGCGGATCGGCCGGCTCGTGTCGAAGGAACAGC
TCGTCGATCACCTGTGCGAATGGGGCGAGGAAGTCAGCAACAACGCGATCGAAGTCTACGTGCACCGGCTGCGCAAGAAG
ATCGAACCGAGCGGCGTGCGGATCTCGACCGTGCGCGGCCTCGGCTATTGCCTCGAGAAGGTCGCGCCCGCGACGCCGGC
CGACACGGCGGCGCCCCAGCCCGCGGCGGCCGGCACGCCGCTGCGCTGA

Protein sequence : 
MQTLYKKTVFCASPQCKALCTNNFGDSRAGANALPAPVSNMRILIAEDDSILADGLTRSLRQSGYAVDHVKSGVDADTAL
SMQTFDLLILDLGLPKMSGLDVLKRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA
GGGPTVVRHGSLAFDQVGRIAYANDHVLDLSARELGLLEVLLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKK
IEPSGVRISTVRGLGYCLEKVAPATPADTAAPQPAAAGTPLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_2042 YP_621916.1 two component transcriptional regulator BAC0083 Protein 4e-36 45
Bcen_2042 YP_621916.1 two component transcriptional regulator BAC0487 Protein 1e-36 44
Bcen_2042 YP_621916.1 two component transcriptional regulator BAC0638 Protein 5e-30 44
Bcen_2042 YP_621916.1 two component transcriptional regulator BAC0308 Protein 4e-31 41
Bcen_2042 YP_621916.1 two component transcriptional regulator BAC0197 Protein 2e-33 41
Bcen_2042 YP_621916.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcen_2042 YP_621916.1 two component transcriptional regulator VFG0473 Protein 2e-41 44
Bcen_2042 YP_621916.1 two component transcriptional regulator VFG1390 Protein 1e-35 42