Gene Information

Name : xerD (Ldb0843)
Accession : YP_618882.1
Strain : Lactobacillus delbrueckii ATCC 11842
Genome accession: NC_008054
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 732658 - 733554 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAGCTCGCTGAGCAGATAAACGATTATCTGCGCTACAGCCAGATTGAGCGGGGACTCAGTCCGAATACCATCGC
GGCCTACCAGCAGGATTTGCTGGAGTTTCTGGCCTTTGTCAAAGAAGAGCAGATGCCCGCTTGGCCGCTGGAAGCCGTGG
AAATTGATGCTTTTTTAGCTAAAGAGCGGGACTTGGGCAAGGCTAACAGCTCTATCAGCCGGCTGGTGTCGACCTTGAGC
CGTTTTTACCAGTGGCTGGTCCGCCAGCAGCTGATCGCCCTGGACCCCATGAGCCAGATTGATGCTCCCAAGCGGGAGAA
GCGGATGCCCTTGGCTTTGACTGAGGCTGAAGTGGGCAAGCTCTTAGAGCAGCCAGATCTGACTACGGATTTAGGAATCC
GCGACCGGGCCCTTTTGGAACTGCTTTACGCGACGGGGATGCGGGTCAGCGAAGCGGTCAACTTGCAATTAGCCGATGTC
CATGCCAACCTGCAGCTGATCAAAGTCCTGGGCAAGGGGAGCAAGGAACGGCTTATTCCGGTGAGCGCCCTGGCCTTAGA
CTGGATTAAGCGCTACCTGCCTGTCAGGGACCAGCAGCTTTTAAAGCGGGGCAAGAGTAGCGATTACCTGTTCTTGAACA
GCCGGGGCGGGCAGTTGACCCGGCAGGCCGTCTGGCAGAAGATCAAGAAGTACTGCCAGCAGGCCGGCATTGCCAAGGAT
GTGACTCCCCACACCCTCCGCCACAGCTTCGCGACCCATTTGCTGGAGCATGGGGCGGATTTGCGGGTGGTCCAGGAAAT
TCTGGGCCATACTGACATTTCCACGACCCAAATCTATACTAATCTGACCCAGAAGCATATCCTGGACGTCTACCAAAAGA
CCCATCCCCGCATTTAG

Protein sequence :
MNKLAEQINDYLRYSQIERGLSPNTIAAYQQDLLEFLAFVKEEQMPAWPLEAVEIDAFLAKERDLGKANSSISRLVSTLS
RFYQWLVRQQLIALDPMSQIDAPKREKRMPLALTEAEVGKLLEQPDLTTDLGIRDRALLELLYATGMRVSEAVNLQLADV
HANLQLIKVLGKGSKERLIPVSALALDWIKRYLPVRDQQLLKRGKSSDYLFLNSRGGQLTRQAVWQKIKKYCQQAGIAKD
VTPHTLRHSFATHLLEHGADLRVVQEILGHTDISTTQIYTNLTQKHILDVYQKTHPRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 44