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Name : secA (Ldb0607) Accession : YP_618695.1 Strain : Lactobacillus delbrueckii ATCC 11842 Genome accession: NC_008054 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 515418 - 517820 bp Length : 2403 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCAAACATTTTAAAGAAGTTATACAACGCTGATAAAAGAGAACTTAAGCGTTTTGAAAAAATTGCTGACCAAGTAGA GTCATACGCTGACCAAATGGCCGCTCTCTCTGACGAAGAATTGCAGGCCAAGACGCCGGAATTCAGGAGCCGGATTGAAA AGGGCGAAAGCTTAGACGACCTGCTGCCGGAAGCCTTTGCCGTATCCCGGGAAGCTTCCAAGCGGGTTCTGGGCCTGTAC CCATTCCGCGTGCAGATCCTCGGCGGGATTGCCCTGCACCGGGGCAACATTGCCGAAATGATGACCGGGGAAGGTAAGAC CTTGACGGCCACCATGCCGGTTTACCTCAACGCTTTGTCTGGCAAGGGCGTGCACGTTGTTACTGTCAACGAATACCTGT CCAGCCGTGACGAAACTGAAATGGGCCAGCTTTACCGCTGGCTGGGCCTGACGGTCGGCTTGAACGTCAGCACCATGTCC CCGGAAGAAAAGCGGAAAGCTTACGCCTGCGACGTAACTTACTCAACCAACTCTGAACTGGGCTTTGACTACCTCCGGGA CAACATGGTTGTCTACAAGGAACAAATGGTGCAGCGGCCACTTAACTACGCCATCATCGACGAAGTTGACTCCATCTTGA TCGACGAAGCGCGGACGCCTTTGATCATTTCCGGTGAAGCTGAACAAGCCAACGCTGACTACGTCCGGGCTGACCGCTTT GTCAAGAAGCTGGTGGAAGACAAGAGCGACAATGACGCCGATGACGATGAAGACCACGGCGACTACAAGATCGACTGGCC AACCAAGACTATTTCCTTGACCAGAACCGGGATCCAGAAGGCCTGCGACCACTTTGGCCTCAAGAACCTTTACGACGTTG AAAACCAGAAGCTGGTCCACCACATCGACCAAGCTCTGCGGGCCAACTACATCATGCTCAAGGACATCGACTACGTTGTC CAAGACGGTGAAGTCCTGATCGTTGACTCCTTTACCGGCCGTGTTATGGAAGGCCGCCGCTTCTCAGACGGCCTGCACCA GGCTATCGAAGCCAAGGAGGGGGTCAAGATCCAGGAAGAATCCCAGACCCAGGCCACAATTACTTACCAGAACTACTTCA GAATGTACCAGAAGCTGTCCGGGATGACCGGTACGGCCAAGACTGAAGAAGAAGAATTCCGTGAAATCTACAACATGGAA GTCATCACCATCCCGACCAACCGGCCAGTTATCAGACAGGACATGCCAGACCTGCTCTACCCGACCCTGGACTCCAAGTT CAAGGCCGTGGTTGACGAAATCAAGGAGCGGCACGCCAAGGGCCAGCCAATCCTGGTCGGCACGGTGTCCATTGAATCTT CTGAACGCTTGAGCCACATGCTGGACAAGGAACACATCCCGCATGCTGTCTTGAACGCCAAGAACCACGCCAAGGAAGCA GCCATCATCATGAATGCCGGCCAAAGAGGGGCAGTTACGATTGCCACCAACATGGCCGGGCGTGGGACTGACATCAAGCT GGGGCCTGGCGTCAAGGAACTGGGCGGTTTGGCCGTAATCGGGACTGAAAGACACGAATCCCGCCGTATCGACAACCAGC TGCGGGGCCGGTCCGGCCGGCAGGGTGACCCGGGTTACACCCGCTTCTACCTGTCCTTGGAAGATGACTTGATGAAGCGC TTCGGGGGCGACCGGGTCAAGGACTTCCTTGACCGCCTGTCCGACAATGACGACGACAAGGTCATCGAAAGCCGCCTGAT CACCCGCCAGGTTGAATCAGCCCAGAAGCGGGTTGAAGGGAACAACTACGACACCCGGAAGCAGACCCTGCAATACGACG ACGTTATGCGGATCCAGCGTGAAATCATCTACAAGGAACGGATGCAGGTTATCGATGAGCAGCAGTCCTTGAAGAGTGTC TTGATGCCGATGATCCACCGGACTATCGACCACCAAGTGGACATGTTCACCCAAGGCGACCGGTCGACTTGGCGCCTGGA CTCCTTGCGCGACTTTATCGTTTCCAGCCTGGCCAGTGAAGAATACGTTGATTCAGAAATCGACTTCAAGACCTTCACGC CAGATGCTCTTAAGCAGCAGCTTTACCAGCTGGTTGAAGACAACTACCAGGAAAAGGAAGCTGCCCTGGCTGATCCGGAA CAAATGCTGGAATTTGAAAAGGTGGTTATCCTCCGCGTGGTTGACGAACACTGGACCAACCACATTGACGCCATGGACCA ATTGCGGCAGTCAATCGGCCTGCGGGGCTACGGCCAGCTGAACCCGCTGGTTGAATACCAGGACTCCGGCTACAACATGT TTGAAGAAATGATCAGCGACATCGAGTTTGACGTGACTCGCCTCTTCATGAAGGCTCAGATCAGAAACAACTTGAGTCGG TAA Protein sequence : MANILKKLYNADKRELKRFEKIADQVESYADQMAALSDEELQAKTPEFRSRIEKGESLDDLLPEAFAVSREASKRVLGLY PFRVQILGGIALHRGNIAEMMTGEGKTLTATMPVYLNALSGKGVHVVTVNEYLSSRDETEMGQLYRWLGLTVGLNVSTMS PEEKRKAYACDVTYSTNSELGFDYLRDNMVVYKEQMVQRPLNYAIIDEVDSILIDEARTPLIISGEAEQANADYVRADRF VKKLVEDKSDNDADDDEDHGDYKIDWPTKTISLTRTGIQKACDHFGLKNLYDVENQKLVHHIDQALRANYIMLKDIDYVV QDGEVLIVDSFTGRVMEGRRFSDGLHQAIEAKEGVKIQEESQTQATITYQNYFRMYQKLSGMTGTAKTEEEEFREIYNME VITIPTNRPVIRQDMPDLLYPTLDSKFKAVVDEIKERHAKGQPILVGTVSIESSERLSHMLDKEHIPHAVLNAKNHAKEA AIIMNAGQRGAVTIATNMAGRGTDIKLGPGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGYTRFYLSLEDDLMKR FGGDRVKDFLDRLSDNDDDKVIESRLITRQVESAQKRVEGNNYDTRKQTLQYDDVMRIQREIIYKERMQVIDEQQSLKSV LMPMIHRTIDHQVDMFTQGDRSTWRLDSLRDFIVSSLASEEYVDSEIDFKTFTPDALKQQLYQLVEDNYQEKEAALADPE QMLEFEKVVILRVVDEHWTNHIDAMDQLRQSIGLRGYGQLNPLVEYQDSGYNMFEEMISDIEFDVTRLFMKAQIRNNLSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-139 | 42 |
