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Name : clpC (Ldb0383) Accession : YP_618512.1 Strain : Lactobacillus delbrueckii ATCC 11842 Genome accession: NC_008054 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 331481 - 333940 bp Length : 2460 bp Strand : + Note : - DNA sequence : ATGCAAAATTCATACAGTAAGAGCAGCAGACAGGTCTTGGAAATTGCCCAGGAACAAGCCAAGGAGTTTCACCACCGCCT GGTCGGGACAGAGCACGTCCTTTTGGCCCTGGTAATCGAAGCTGACGGCAAAGCCGGCAAGATCCTGCGGACCATGAACG TGACGCCGACCGGAGTCAGGGAAGAAATCGAGCGCTACACGGACTACGGCTCAGCGGCCCCGACCAGCTACATGGAATTT TCTCCCCGCCTGACTTTGGCGCTGGATTATGCCAAGCGGAATTCTGAACTCCGGTCCAGCAAGGAAATCGAAACGACTGA CATTCTCCAGGCTTTGGTCTCCAGTGAGCAGATCCTGTCAGCCATGATCCTGCGCAACCTGGACGTGGACCTGGAAAACT TGAAAGACGAACTGGACGACGCCAACCAGGTGACCGGGGAAAGCAGCCAGACCAGCCGGCCAGACGCGGCAGGCAGCAGC CAGTCGCAGACGCCGATTTTGGACCGCTTCGGGATCGACTTGAACCGGCGGGCTAAAGAAGGCGACATTGACCCGGTGAT CGGCCGCCAGCGGGAACTGGACCGGGTGATTCATATCCTGTCCCGGCGGACCAAGAACAACCCCCTTTTGGTCGGTGAGC CTGGGGTCGGCAAGACCGCGGTCGCTGAAGCTTTGGCCAGCGCGATCGTTGCTAAAAAGGTTCCCCGGGACCTGGCTGAC AAGCGGGTGGTTTCACTGGATGTCAACAGCATGGTGGCCGGTACCCGCTACCGGGGTGAATTTGAAGAGCGGATGGACCG CTTAATTAAGGAAGTTACTGCCAGCAAGAATGTCATTCTTTTTGTCGACGAAATCCACTCTTTGGTCAAGGCCGGGGACG CGGAAGGGGCGATGAGCGCCTCCAACACCTTGAAGCCGGCATTGGCCCGCGGGGACATTCAATTGATCGGGGCCACGACT TTTGAAGAATACCGCAAGCACATGGAAAAAGACTCTGCCTTTGTCCGCCGCTTCCAGCTGGTCCGCCTGGCTGAGCCAAA TGAAGAGGAAACCCTGCAAATTTTGCATGGGATCAAGGACAAGTATGAAGACTACCACCGGGTAGCTTTGTCAGAAGAAG CCTTGCAGGCAGCAGTTGATTTGTCCAGCCACTACATTGCCGACCGCTACCAGCCGGACAAGGCCATCGACTTGATCGAT GAAGCCAGCGCGGCGGTTAAACTGGCTAATGACACTGGCGAAGACAAGGACCTGGCTGAAATCGATTTGGAAATCAGCCG GACTCTCAAGCAGAAGAACGATGAAGCAGCCAAGCAGAACTTTGCCCAAGCGGCCAAGCTGCGCGACCAGGAAATCGCCT TGCGGCAAAAGCGGAATGAGATTGCCAAGAAGCTGGCCGGCAAGGATGAGAAGCGGTCAGTCGTTGGGGCTGAAGACGTG GCCAAGGTGGTCTCCATCTGGACCGGGGTTCCGGTAACCCAGCTTAAGACCAGCGAAAATAAGCGCCTGGCCCACCTGGA AGGGATCCTGCATGAAAGAGTCATCGGCCAAGACGATGCCGTCAAGGCCGTGGCCAATGCCATCCGCCGGTCCAGAAGCG GCTTGAAGGACGAGAACCGGCCGATCGGTTCCTTCCTCTTCCTAGGCCCAACCGGGGTCGGCAAGACTGAACTGGCTAAG GCTGTGGCTGAGGCAGTTTTTGGCTCAGAAGACAATATCATCAGAGTCGACATGTCAGAGTACATGGACCGGGAATCTTC CTCCAAGCTGATCGGGTCAGCGCCTGGCTACGTTGGCTACGAAGAAGGGGGCCAGCTCTCCAACAAAGTCCGGGAACATC CTTACTCAGTGGTTCTTTTTGACGAAGTGGAAAAGGCAAACCCGGAAATTTTCAACGTCTTGCTACGGGTCCTGGATGAA GGCTTCATGACTGATTCTCTGGGCCGGAAGGTCGACTTCAGAAACACGATTATCATCATGACTTCCAACCTTGGTTCCAG AAGCTTGGAAGCTGACAGCCATGTGGGCTTCTCAGCCAGCCAGGAAGACCAGGGCAAGCTGATCGCGGAAAAGGTAACCA GGGCCACCAAGGACTTCTTCCGGCCGGAATTTTTGAACCGGATCGACGAAAAGATCGTCTTCAAGCCCCTGGAAGCCAAG CAGCTGCGGAAAATCGTGACGCTTCTGACCCGGAAACTGGTCAAGCGGCTGGCGGAAAAAGATATTACTTTGCGCCTGTC GCCAGCTGCCTTGGACCAACTGGCCAAGGACGGCTACAATCCGGAAATGGGGGCCCGGCCATTGCGGCGGACCATCCAGG ATGAAGTTGAAGACGAATTGGCCCAGGACCTGGTCAGCGAAAAGCTGCAGGCCGGCGATACGGTCAAGATCGGTGCCCGG GGCGGCAAGCTGCGCTTTGAAATCGTCAAGGCCAAGACTGGTGAAAAGATCAAGGGATAA Protein sequence : MQNSYSKSSRQVLEIAQEQAKEFHHRLVGTEHVLLALVIEADGKAGKILRTMNVTPTGVREEIERYTDYGSAAPTSYMEF SPRLTLALDYAKRNSELRSSKEIETTDILQALVSSEQILSAMILRNLDVDLENLKDELDDANQVTGESSQTSRPDAAGSS QSQTPILDRFGIDLNRRAKEGDIDPVIGRQRELDRVIHILSRRTKNNPLLVGEPGVGKTAVAEALASAIVAKKVPRDLAD KRVVSLDVNSMVAGTRYRGEFEERMDRLIKEVTASKNVILFVDEIHSLVKAGDAEGAMSASNTLKPALARGDIQLIGATT FEEYRKHMEKDSAFVRRFQLVRLAEPNEEETLQILHGIKDKYEDYHRVALSEEALQAAVDLSSHYIADRYQPDKAIDLID EASAAVKLANDTGEDKDLAEIDLEISRTLKQKNDEAAKQNFAQAAKLRDQEIALRQKRNEIAKKLAGKDEKRSVVGAEDV AKVVSIWTGVPVTQLKTSENKRLAHLEGILHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGSFLFLGPTGVGKTELAK AVAEAVFGSEDNIIRVDMSEYMDRESSSKLIGSAPGYVGYEEGGQLSNKVREHPYSVVLFDEVEKANPEIFNVLLRVLDE GFMTDSLGRKVDFRNTIIIMTSNLGSRSLEADSHVGFSASQEDQGKLIAEKVTRATKDFFRPEFLNRIDEKIVFKPLEAK QLRKIVTLLTRKLVKRLAEKDITLRLSPAALDQLAKDGYNPEMGARPLRRTIQDEVEDELAQDLVSEKLQAGDTVKIGAR GGKLRFEIVKAKTGEKIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-177 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_618512.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 0.0 | 50 |
| clpC | YP_618512.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 7e-150 | 50 |
