Gene Information

Name : epsIC (Ldb2009)
Accession : YP_619646.1
Strain : Lactobacillus delbrueckii ATCC 11842
Genome accession: NC_008054
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 1678389 - 1679162 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTCGGTCGAAAGAAGCATTTAAACAACGATACGATGAAGAACGGGGTCAAGCTGATTACTTTGGCCAACCCGCA
AAGCGTTATTTCAGAACAGTTCAGAAACATCCGAACCAATATCAATTTTATGAACGTTGATAGGGAAGTAAAGACGATTG
TCTTTACTTCAGCCATGGCCAGCGCCGGCAAGTCGACGGTCAGTGCTAATGTAGCCATTACCATGGCGCAAGCCGGCAAG
AAGACGATCTTGGTCGATGCGGACTTGCGCCGGCCAACTATGCACTCTACTTTCAATGTATCCAATAGCAACGGCTTGAC
CACTTTGTTGACTAGCCGGTCTATGGAAATGGACGCAAACAGCGTGATCCGGGAAAGTGGTGTAGAGAACCTGTCAATCT
TGACGGCAGGTCCGATTCCGCCAAACCCATCAGAACTTCTGTCTTCCAAGCATATGTTGGATTTGATTGAAGATTTAAAG
CAAGAATATGATATGGTCGTGCTTGACTTAGCACCGATCTTGGACGCGGGCGAAACCCAGCAACTGACCAGTTTTTTGAA
CGGGACGATCTTGGTTGTGCGCCAGGCATATTCACAGAAGTCAGCGGTTAAGCGGGCAGTTGAGCTACTTAAGCTGACTA
AGTCACCAATTTTAGGTTATGTTATGAACGATGTTGATGCCGATGGGGATGACGGCTATGGATATGGTTATGGTTACGGC
TACGGTTATGGCGAAGAAAAGGAGAAGAAGGGTCTCTTTGGGAGAAAGAAGTAG

Protein sequence :
MAFGRKKHLNNDTMKNGVKLITLANPQSVISEQFRNIRTNINFMNVDREVKTIVFTSAMASAGKSTVSANVAITMAQAGK
KTILVDADLRRPTMHSTFNVSNSNGLTTLLTSRSMEMDANSVIRESGVENLSILTAGPIPPNPSELLSSKHMLDLIEDLK
QEYDMVVLDLAPILDAGETQQLTSFLNGTILVVRQAYSQKSAVKRAVELLKLTKSPILGYVMNDVDADGDDGYGYGYGYG
YGYGEEKEKKGLFGRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-35 42
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsIC YP_619646.1 hypothetical protein VFG1298 Protein 3e-33 42