Gene Information

Name : Ldb1828 (Ldb1828)
Accession : YP_619542.1
Strain : Lactobacillus delbrueckii ATCC 11842
Genome accession: NC_008054
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1554229 - 1554909 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGTATTCGGTGAGAATTACAGAGCTTGAAAAAGAATTTAAAAACGGCAGGAAGATTTTTTCCGGATTAAATCTGGAACT
TGAAGAATCGTCTTTGACAGCCCTAGTTGGCGCGTCAGGTGAAGGTAAAACTACTCTTTTGAACGTGATCGGTCTTCTGG
ATACGGATTACTCCGGGCAAGTTGAATTGTTTGGCCAAAAAGTCAACGAGCTTAACCAGACTGAAATGGCTCGCTTGCGG
AATCAGCAAATTGGCTTTATCCTGCAAGAGCCCTTGTTGATCAAAAATATGAGTGTTAGGGACAATATTTTGCTGCCAAC
CGTATACTTGGACAAATCACTGCGCAAGAGCAAAGACTACTACCTTGCCAGAGCCGAGCAATTTGCCGATCAGTTAGGAG
TCAGTCAAGTTTTTGATCAAAAGCCGGCAACCTTATCAGGTGGACAAAAGCAGCGGGTGACTGCAATCCGGGCTTTGATT
AATGACCCACAGCTCATCTTGGCGGATGAACCAACGGGATCGTTGGACGAAGAAAACGCGAAAATCATCATGGACCTGCT
GAAGAAACTCAGCCGGGAAGGGAAAACCGTCTTTACGGTTACGCATGATTCGCATATTGCCAGTCAGCACGATAGGGTGC
TGCAACTAAAAAACGGAAATATTACTGTAAAGGAGAATTGA

Protein sequence :
MYSVRITELEKEFKNGRKIFSGLNLELEESSLTALVGASGEGKTTLLNVIGLLDTDYSGQVELFGQKVNELNQTEMARLR
NQQIGFILQEPLLIKNMSVRDNILLPTVYLDKSLRKSKDYYLARAEQFADQLGVSQVFDQKPATLSGGQKQRVTAIRALI
NDPQLILADEPTGSLDEENAKIIMDLLKKLSREGKTVFTVTHDSHIASQHDRVLQLKNGNITVKEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ldb1828 YP_619542.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 44