|
Name : polA (Ldb1512) Accession : YP_619338.1 Strain : Lactobacillus delbrueckii ATCC 11842 Genome accession: NC_008054 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1304709 - 1307369 bp Length : 2661 bp Strand : - Note : - DNA sequence : ATGAACAAGAAGTTACTTTTAATCGATGGCAATTCCGTGGCCTTCCGGGCTTTTTTCGCCATGTACCAGCAGCTGGACAA GTTTAAGAATCCAGAAGGTCTCCACACCAACGCCCTCTATGCCTTTAAGAACATGCTGGACGTGGTCTTGAAGCAGGAAG ACCCAAGCCATATCCTGGTGGCCTTTGACGCTGGCAAGACCACCTTCAGAACCGCCATGTACAAAGACTACAAGGGCGGC CGGGACAAGACTCCGGCAGAACTTTCCGAACAGCTCCCTTACCTGCGGGAAATGCTCAAGGACATGGGAATCAAGAGCTA CGAACTGGCCAACTATGAAGCCGACGACATCATCGGCACCATGGCTAAAAAAGGAGCCGAAGCCGGCTATGAAGTGGCCG TTGTTTCCGGGGACAAGGACTTGACCCAATTGGCCAGTGACCATGTCACCGTCTACGTGACCAAGTCCGGGGTAACTAAA CTGGAAGCCTTCACTCCAGACCACATGAAAGAAGTCAACGGGGTGACCCCGACTGAGTTCATCGACATGAAGGCTTTGAT GGGTGACCCGTCCGACAACTACCCAGGCGTGGCCAAGGTCGGCCCCAAGACTGCCTCTAAATTGATCCAGGAATACGGCA GCGTGGAGAACTTGTATTACCACGTTGATGAAATGAAGAAGTCCAAGCTGAAGGAAAACCTGATCGCCGGCAAGGACAAT GCCCTTTTGGGTAAAAAGCTGGCCACCATCAAGTGCGACAGCCCGGTGGAAGTGACCCTTGATGACCTTAGCTATGAGGG CAGCAATGTCGACGACCTCCGTCGCTTCTACGAAAAGATGAACTTCCGCCGCTTTCTGGCCGACTTGGCCCAAAAAGGGG AGTTGACTGAAAACAAGACGGAAGTTAAAAAGCAGGACTATGTCGTGCTCAGTGCTGATAACTTAGACCAGCTGCCAAAG GCTGCTGAAGTTACTTTCTACCTGGCCATGTTTGGCGACAACTACCACCTGGCTGACTTCGCCGGCTTTGCCTTGAAAAT CGGCGGGGAAACTTTCGTCAGCCGGGATGTCTTCCTCTTGCAGGAAAGTCCCTTAAAAGAAATGTTGGAAGATTCTGCCG TTCAAAAGAACGTCTTTGACTTAAAACGGACCACTTACGGCCTCTATCGGCTGGGGATTAAGGCTGAAGGCTTGTCCTTT GACCTGCTCTTGGCTTCTTACCTGGTTGACAATGAGAAAAATTCCAACGACCTGGGTGAACTGGTCCAAGGCTACGACTA CTATGACTTAAAGACCGACCTGGAAGTCTACGGGAAGGGGAAGAATGCCAAGATTCCGGCAGATGACGCGGTCTTCTTCA ACCACCTGGCTGGCAAGACCGCGGCGATCGCGGCTTTGAAGGACAGTCTTTTAAAGCAGTTAAAAGACCATGAGCAAGAT GACCTCTACGATTCAATCGAACTGCCAACGGCCAGAGTCCTGGCCAAGATGGAGATGAACGGGATCAAGGTCCAGCCTTC CCGCTTGAAGGAACTAGAAAACGACTTTGCTGTCCGTTTAAAGGAACTGGAAGAGAAGATCTACAAGGAAGCCGGGGAAG AATTCAACCTGAATTCACCAAAGCAGCTGGGGGTCATCCTCTTTGAAAAGCTGGGCTTGCCAGTCATCAAGAAGACCAAG ACCGGTTACTCCACTTCAGTTGAAGTCTTGAACCAATTGAAAGAACAAAGCCCGGTTGTCAGTGACATCCTGGAATACCG GCAGATTTCCAAGATCCAATCAACCTACGTTAAGGGCCTCTTAGACGTCATCGATGAGCGTGACGGCCGCATCCACACCC GCTACCTGCAGACTTTGACGGCAACTGGCCGCCTGTCTTCAGTTGACCCTAACTTGCAGAACATCCCAACCAGAACGGAA GAAGGTAAGCAGATCAGAAAGGCTTTTGTCCCATCAAGTCCGGATGGCTATATCTACTCCTGCGACTACTCCCAAATCGA GCTCCGGGTCCTGGCCCATGTCTCAGCCGACCCGAACATGCAGGAAGCCTTCAAGACCGGCTACGACATCCACGCCCACA CGGCCATGAAGATCTTCCATTTAAGCAGCGTTGACGAAGTAACGTCTTTGCAAAGACGGCGGGCCAAGGCGGTCAACTTT GGGATCGTCTACGGGATCTCTGACTACGGCCTCTCCAAGAACCTGGACATCTCCCGCAAGCAGGCCAAGGAATTCATCAA CGAATACTTTGACCAATACCCAGGCATTCAGGCCTACATGGACTGGGCTGTTAAAGACGCCAGAGAAAAGGGCTACGCGG AAACCATCATGCACCGCCGCCGCTACCTGCCAGATATCCACGCTAAGAACTTTAATGTCCGCTCTTTCGCGGAAAGAACG GCGATCAACTCCCCAATCCAAGGGTCAGCCGCGGACATTATGAAGATTGCCATGATCAACATGCAAAAGAAGCTGGATGA ACTGGGATTAAAGACCAAGATGGTCGTCCAGGTCCACGACGAATTGATCTTTGACGTACCAGCTGATGAACTGGAAACGA TCCAGAAGATTGTCCCGTCAGTCATGCAGGCAGCTGTTAAGTTGGACGTGCCTTTAGTCGCTGACGCCAGCTGGGGCCAT GACTGGTATGAAGCAAAGTAG Protein sequence : MNKKLLLIDGNSVAFRAFFAMYQQLDKFKNPEGLHTNALYAFKNMLDVVLKQEDPSHILVAFDAGKTTFRTAMYKDYKGG RDKTPAELSEQLPYLREMLKDMGIKSYELANYEADDIIGTMAKKGAEAGYEVAVVSGDKDLTQLASDHVTVYVTKSGVTK LEAFTPDHMKEVNGVTPTEFIDMKALMGDPSDNYPGVAKVGPKTASKLIQEYGSVENLYYHVDEMKKSKLKENLIAGKDN ALLGKKLATIKCDSPVEVTLDDLSYEGSNVDDLRRFYEKMNFRRFLADLAQKGELTENKTEVKKQDYVVLSADNLDQLPK AAEVTFYLAMFGDNYHLADFAGFALKIGGETFVSRDVFLLQESPLKEMLEDSAVQKNVFDLKRTTYGLYRLGIKAEGLSF DLLLASYLVDNEKNSNDLGELVQGYDYYDLKTDLEVYGKGKNAKIPADDAVFFNHLAGKTAAIAALKDSLLKQLKDHEQD DLYDSIELPTARVLAKMEMNGIKVQPSRLKELENDFAVRLKELEEKIYKEAGEEFNLNSPKQLGVILFEKLGLPVIKKTK TGYSTSVEVLNQLKEQSPVVSDILEYRQISKIQSTYVKGLLDVIDERDGRIHTRYLQTLTATGRLSSVDPNLQNIPTRTE EGKQIRKAFVPSSPDGYIYSCDYSQIELRVLAHVSADPNMQEAFKTGYDIHAHTAMKIFHLSSVDEVTSLQRRRAKAVNF GIVYGISDYGLSKNLDISRKQAKEFINEYFDQYPGIQAYMDWAVKDAREKGYAETIMHRRRYLPDIHAKNFNVRSFAERT AINSPIQGSAADIMKIAMINMQKKLDELGLKTKMVVQVHDELIFDVPADELETIQKIVPSVMQAAVKLDVPLVADASWGH DWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 53 |
