Gene Information

Name : Ldb1119 (Ldb1119)
Accession : YP_619046.1
Strain : Lactobacillus delbrueckii ATCC 11842
Genome accession: NC_008054
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 951683 - 952435 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAAAAGTGATGACTGTCAACAACGTTACAAAGACTTACGGTAAAAAAGGGGAGAAGCAGTTCCAGGCCTTAAAGGG
CGTCTCGCTCAGCGTAGCCAAGGGCGAATTCGTCGCCATTATGGGGACTTCCGGTTCTGGTAAGACCACTCTTTTGAACA
TCATGTCGACCTTGGACAAGCCAAGCAGCGGCGAGGTTACGATTAACGGCAAAAACGTCGCCAAGCTGAAGAAGAACCAG
ATGGCCGACTTCCGGGCTAAAGAAATTGGCTTTATCTTCCAGGACTTCAACCTCTTGGACAACCTGACCGCTAGGGAAAA
CATTGCTCTCCCTTTGTCTTTGCAAGGGGTCAAGAGCTCAGAAATCGATTCTAAGGTTGATAAGATCGCCGCTAAGCTCA
ACATCAGCGAAGTCTTGGAAAAGTACCCAGCAGCCATTTCCGGCGGGCAGAAGCAAAGAGTTGCTGCTGCCAGAGCCTTG
GTTCATGAACCGGCAATCTTGATGGCCGATGAACCAACAGGGGCCCTGGATTCTAAGTCTTCCAGGGCCTTGCTGGACAC
GATGGAGCTGCTTAATGAGAAAGACCAGGTTTCAATCTTGATGGTCACTCACGATCCGTTTTCTGCATCATTTGCTGACC
GGATTCTCTTTATCAGGGATGGCTTGATTGATGAAGAGATCAAGCGCGGGGACTTGAAGCGGCAGGACTTTTACAAGAAG
CTGATCAGCCAGCTCAGCGAAAATACCGACTAG

Protein sequence : 
MEKVMTVNNVTKTYGKKGEKQFQALKGVSLSVAKGEFVAIMGTSGSGKTTLLNIMSTLDKPSSGEVTINGKNVAKLKKNQ
MADFRAKEIGFIFQDFNLLDNLTARENIALPLSLQGVKSSEIDSKVDKIAAKLNISEVLEKYPAAISGGQKQRVAAARAL
VHEPAILMADEPTGALDSKSSRALLDTMELLNEKDQVSILMVTHDPFSASFADRILFIRDGLIDEEIKRGDLKRQDFYKK
LISQLSENTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ldb1119 YP_619046.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-44 46
Ldb1119 YP_619046.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-40 45
Ldb1119 YP_619046.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-38 43
Ldb1119 YP_619046.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-36 42