Gene Information

Name : Sala_0810 (Sala_0810)
Accession : YP_615863.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : -
Position : 815749 - 817083 bp
Length : 1335 bp
Strand : +
Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine

DNA sequence :
ATGTCGCCCTATGCCACCCCGACCGCTCCCCGCCCGCCGCTCCGCGTCGCGCTTGCCGGGATCGGCGTCGTCGGCGGCGG
GGTGGTAAGGCTGCTCGAGGCGAACCGCGCCCTGATCGCGCGGCGCGCGGGTCGGCCGATCGAGATTGTCGCGGTGTCTG
CGCGCGACCGGCACAAGGATCGCGGCGTCGACCTGTCGCGCTATCGCTGGGAAGACGATATGGACGCGCTCGTCGCGGCG
GGCGATGTCGATGTCGTCGTCGAGATGATCGGCGGCGCCGACGGATCGGCGCTGACGCTGGCGCGCCGCGCGCTGGGCGC
GGGCAAGGCGCTGGTCACAGCGAACAAGGCGATGATCGCGCATCACGGGATCGATCTCGCCCGGATCGCCGAAGAAAAGG
ACACGCCGCTGAAATACGAAGCCGCTGTCGCGGGCGGCATCCCTGTCATCAAGGCGATCCGCGAAGGCGCGTCGGCGAAC
GAGATCGCGCGCGTCTATGGCATCCTCAACGGCACCTGCAATTATATCCTGACGCAAATGGAACGGAATGGCGCGAGCTT
CGCCGATGCGCTGGCCGCCGCGCAGGCCGAGGGCTATGCCGAGGCCGACCCGAGCTTCGATGTCGATGGCATCGACGCCG
CGCACAAGCTGTCGATTCTCGCCGCGCTCTGTTTCGGGACGCGGCTCGACATCGGCGCGGTGACTGCCGACGGCATCCGG
GGCCTGATCGCGGCCGACATCCGCGAGGCCGAGGCGCTGGGGCACCGCGTCCGCCTGATCGGCATGGCCGAGCGCGACAG
CGCCGGGAACGGCGGCGCCCTCTATCAGCATGTCCAGCCGTGCCTGGTGCCCGCCGACCATCCGCTCGCCTATGTGCCCG
GCGCGCTGAACGCCGTGGTCGCCGAGGGCAATTTTGTCGGCCGCCTGTTCTTCGAGGGCGCCGGCGCCGGGGCAGGACCG
ACCGCTTCGGCGATCGTGGCCGACATCATCGACATCGCGCGCGACGAATATGGCCCGGCCTTCGCGATGCCGGTCGATGC
ACTCGACGCGGCGCCCGCCGCCGATGCCGGCGCGCGCGTCGGCAAACATTATGTCCGCCTGATCGTCGAGGACCGGATCG
GCGTGCTCGCCGAGATCGCGGCGGCGATGCGCGACGCCGGCGTGTCGATCGAAAGCCTGATCCAGCGCGGCAGCGAAGAC
GGTGACGACGGCGTCGTCATCGTGCTCGTCACCCATGAAGGCCCGGCAAGCGCGATCCATGCGGCGCTCGCGATTCTGGC
GGGGTCGGACCATGTCGTCGGCGCGCCGATGCTGATGCCGATCCTGGCGCTCTAA

Protein sequence :
MSPYATPTAPRPPLRVALAGIGVVGGGVVRLLEANRALIARRAGRPIEIVAVSARDRHKDRGVDLSRYRWEDDMDALVAA
GDVDVVVEMIGGADGSALTLARRALGAGKALVTANKAMIAHHGIDLARIAEEKDTPLKYEAAVAGGIPVIKAIREGASAN
EIARVYGILNGTCNYILTQMERNGASFADALAAAQAEGYAEADPSFDVDGIDAAHKLSILAALCFGTRLDIGAVTADGIR
GLIAADIREAEALGHRVRLIGMAERDSAGNGGALYQHVQPCLVPADHPLAYVPGALNAVVAEGNFVGRLFFEGAGAGAGP
TASAIVADIIDIARDEYGPAFAMPVDALDAAPAADAGARVGKHYVRLIVEDRIGVLAEIAAAMRDAGVSIESLIQRGSED
GDDGVVIVLVTHEGPASAIHAALAILAGSDHVVGAPMLMPILAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 3e-34 41
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 3e-34 41