Gene Information

Name : Sala_0801 (Sala_0801)
Accession : YP_615854.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 807523 - 808188 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGATCTTGATTGTCGAAGACGAACCCACGCTGGGGCCGCAGCTCAAAGCGACGCTGGAGGGGGCGGGCTATGCCGT
CGACCTCGCGACCGATGGCGAGGACGGGCATTTTCTTGGCTCGACCGAAACCTATGACGCTGCGATTCTCGACCTCGGCC
TCCCCGAAATCGACGGATTGACCGTGCTCGACCGTTGGCGGCGCGAAAAGCGCAACTTTCCGGTTCTCGTGCTGACGGCG
CGCGACAGCTGGTCGGACAAGGTGGCGGGGCTCGACGCCGGTGCCGACGACTATCTCGCCAAACCCTTCCAGACCGAGGA
ACTGATCGCCCGCCTGCGCGCGCTGATCCGCCGCGCGTCGGGCAATGCGTCGAGCGAACTCACCGCGGGCGATGTCCGGC
TCGATACACGATCGGGCCGCGTCACCCTCGCCGGCGAGCCGGTGAAGCTCACCGCGCAGGAATATAAGCTCCTCTCCTAC
CTGCTCCACCACAAGGGCAAGGTCGTGTCGCGCACCGAGTTGATCGAACATATCTATGACCAGGATTTCGATCGCGATTC
GAACACGATCGAGGTTTTCGTCACGCGCATCCGCAAGAAACTGGGCGCCGACATCATCACCACGATCCGCGGTCTCGGCT
ATCAGCTCGACGACCCGCAGGGTTGA

Protein sequence : 
MRILIVEDEPTLGPQLKATLEGAGYAVDLATDGEDGHFLGSTETYDAAILDLGLPEIDGLTVLDRWRREKRNFPVLVLTA
RDSWSDKVAGLDAGADDYLAKPFQTEELIARLRALIRRASGNASSELTAGDVRLDTRSGRVTLAGEPVKLTAQEYKLLSY
LLHHKGKVVSRTELIEHIYDQDFDRDSNTIEVFVTRIRKKLGADIITTIRGLGYQLDDPQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-23 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_0801 YP_615854.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-31 46
Sala_0801 YP_615854.1 two component transcriptional regulator CP004022.1.gene1005. Protein 2e-32 45
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0487 Protein 4e-25 45
Sala_0801 YP_615854.1 two component transcriptional regulator NC_002695.1.913289.p Protein 5e-32 44
Sala_0801 YP_615854.1 two component transcriptional regulator CP000647.1.gene1136. Protein 8e-33 44
Sala_0801 YP_615854.1 two component transcriptional regulator CP001918.1.gene2526. Protein 1e-31 44
Sala_0801 YP_615854.1 two component transcriptional regulator CP000034.1.gene2022. Protein 4e-32 44
Sala_0801 YP_615854.1 two component transcriptional regulator CP001138.1.gene1939. Protein 2e-32 44
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0530 Protein 8e-33 44
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0308 Protein 4e-20 43
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0197 Protein 7e-25 43
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0111 Protein 2e-26 41
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0083 Protein 8e-22 41
Sala_0801 YP_615854.1 two component transcriptional regulator BAC0638 Protein 3e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_0801 YP_615854.1 two component transcriptional regulator VFG0473 Protein 5e-24 45
Sala_0801 YP_615854.1 two component transcriptional regulator VFG0475 Protein 2e-32 44
Sala_0801 YP_615854.1 two component transcriptional regulator VFG1390 Protein 6e-20 41
Sala_0801 YP_615854.1 two component transcriptional regulator VFG0596 Protein 2e-20 41