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Name : Sala_0444 (Sala_0444) Accession : YP_615498.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Unknown Product : phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 454701 - 455954 bp Length : 1254 bp Strand : - Note : - DNA sequence : ATGCCTCTGACGGAGACTCAAGCCAAGAATGCAAAGCCACGCGAGAGAGCGTACAAGCTTGCCGACAGCGAAGGCTTGTT CCTGCTCGTCCAGCCGAACGGCACGAAGCTTTGGCGGATGAAATACCGATTTGCAGGCAAGGAGAAGTTGCTGTCGTTTG GCGCTTATCCGGCGTTGGGGATCGCCGCCGCCCGGGACAAACGCAAAGCGGCCAAGGCGCTCCTTGCCGAGGGCAAGGAT CCAATGAAGGCCAAGAGGGAGGTTATATCGGAGAACGGTGACACCTTCTACATGGTGGCGAAACGTTGGCACGAGAACCG CCAGTCGGCGTTGAATCCGGCACATGCCGAACGTGTCTGGTCACGAATGGAGCGGGACGTGTTCCCCTCCCTAGGACAGA GGCTGATCCATGAGATCACTGCCCCCGAGGTCCTGGAGATGATCCGCAAGATTGAGATACGAGGCGCGCTGGATATCAGT CGGCGTGCCAAGCAAGGGGTAGGGCAGGTCTTTCAGTTCGCGATTGCTTGCGGGCTGGCATCCAGCGATCCCACTGCTCA CCTTAGTGGAGCCCTCAAGCCCCGGCCCAGGGTGAAGCACATGAGCCGCCTTCCTCTTGATGAAGTGCCTGCGTTCCTCG AAAAGCTCCGAGCATATCAAGAGGAAGGTGACCGGCGCTCGGCAATCACCCGCGATGCGGTACTATTCGCCTTGCTTACC TGGGTCAGGACAAAAGAGCTTCGACTGGCTGTCAAATCCGAATTTGAAAATCTCGATGGTACGGATACCGTTTGGCGAAT TCCGGCTGCGCGCATGAAGATGGGGCGTGAACACCTTGTGCCACTCTCCGCTCAGGCCGCACTCATTGCTAGAAAAATGG TATCGACGGCGACCGGTGATCACCTGTTTCCCGGGACCCACCCAGACAAGCCGTTGTCTGAAAACACGATGATCTATGCG CTTTACCGCCTTGGCTATCATAGTAGGCAGACCATCCACGGCTTTCGAGGGCTCGCCAGCACATGGGCGAACGAGCAGTT GGTTGAGTTTGGCAAGCCAGCGATGTGGATCCGGAAGTACCATGAGGATTGGGTCGAGATGCAGCTCGCTCATTCAGAGA AGAATGATGTGCGGGGGGCTTACAACGCGGCAGAGTATCTCGCACCCCGCCGGCGAATGATGCAGGACTGGGCTGATTTC CTCGATGGGCGCAAGGTGCTCGACATCAGGAAGGGACGAAAGCGGGCTGCGTGA Protein sequence : MPLTETQAKNAKPRERAYKLADSEGLFLLVQPNGTKLWRMKYRFAGKEKLLSFGAYPALGIAAARDKRKAAKALLAEGKD PMKAKREVISENGDTFYMVAKRWHENRQSALNPAHAERVWSRMERDVFPSLGQRLIHEITAPEVLEMIRKIEIRGALDIS RRAKQGVGQVFQFAIACGLASSDPTAHLSGALKPRPRVKHMSRLPLDEVPAFLEKLRAYQEEGDRRSAITRDAVLFALLT WVRTKELRLAVKSEFENLDGTDTVWRIPAARMKMGREHLVPLSAQAALIARKMVSTATGDHLFPGTHPDKPLSENTMIYA LYRLGYHSRQTIHGFRGLASTWANEQLVEFGKPAMWIRKYHEDWVEMQLAHSEKNDVRGAYNAAEYLAPRRRMMQDWADF LDGRKVLDIRKGRKRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 3e-60 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 3e-60 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-60 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-60 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 8e-61 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 6e-61 | 42 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 1e-59 | 42 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-58 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-58 | 41 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-58 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sala_0444 | YP_615498.1 | phage integrase | VFG0783 | Protein | 1e-60 | 42 |
| Sala_0444 | YP_615498.1 | phage integrase | VFG0598 | Protein | 7e-59 | 41 |
