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Name : Sala_0417 (Sala_0417) Accession : YP_615471.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 424434 - 425963 bp Length : 1530 bp Strand : + Note : - DNA sequence : GTGATCGACATGGACCTACTCAGTGTGATCCGCCGGTGGCATTTCCGCCAAGGCATGGCCATTCGTGAGATCAAGCGGCG GACCGGCTTATCACGCAACACGATCCGCAAATATCTGCGAGCAGACGCGGTAGAGCCGGTGTTTAAGGTTCCCGACCGGC CGAGCAAGCTGGACCCGTTTTCCGAGAAGCTGACAGGTTGGCTGCGCGTGGAGTCGGGCAAATCGCGCAAACAGAAACGT ACGGCCAAGCAGCTTTACGCTGATCTCGTCACTTTGGGCTATGACGGCTCGTATGCTCGCGTGGCGGCCTTTGCCCGCGA TTGGAAGCGCGACCGCCAGTATGAGCAGCAAACCAGCGGACGCGGGACCTTCGTGCCGCTGGTTTTCCAGCCTGGCGAAG CCTTCCAGTTCGATTGGAGCGAGGATTACGCCGTGCTGGGTGGCAAGCAGGTCAAGCTGCAGGTGGCCCATACCAAGCTA TCACACAGCCGGGCCTACATCGTTCGGGCCTATCTGTTGCAGACGCATGAGATGCTGTTCGACGCCCTGACGCAGGCATT CCGAGTGCTGGGCGGCATTCCCCAACGCGGGATCTTTGATAATATGAAGACGGCGGTCGACAAGATCGGCCGTGGTAAGG CGCGCCAAGTCAACGCCCGGTTCGCCGCCCTGGCCAGCCATTATCTATTCGAAACAGACTTCTGCAATCCAGCATCGGGC TGGGAAAAGGGACAGGTCGAGAAGAACGTTCAGGATGCCCGTCACCGTCTGTGGCAGCCCATGCCCAGCTTCCCAGATCT TGCAGCTCTCAATGCCTGGCTTGAGGAACAATGTGTCGCGCAGTGGGCAGAAATCCAGCACGGCACATTACCTGGCACCA TCGCCGATGTGCACGCCGAAGAGGTAATCAGCTTGATGCCCATGGGGAGGCCCTTCGATGGCTTCGTCGAGCAGACCAAG CGCGTGTCGCCCACCTGCCTAATCGCCTTCGAGCGCAACCGTTACAGTGTGCCAGCCTCCTTTGCCAATCGGCCCGTCAG CCTGAGAGTTTACCCCGAGCGGCTTGTCATCGTCGCGGAAGGACAAGTCTTGTGCGAACACGAGCGGATCATTGACCGGT CCCATCAGAAGCCGGGACGCACGATCTATGACTGGCGCCACTATCTGGCTGTCGTTCAGCGCAAGCCCGGCGCCCTGCGC AATGGTGCGCCATTCCTTGAGATGCCCGAGGCATTCCGCCAGTTGCAGACCCAACTGCTCAAGCGGCTCGGCGGTGACAA GGAGATGGTTGAGATCCTATCTCTTGTTTTGCACCATGATGAGCAGTCCGTTTTATGCGCAGTCGAGTTGGCTCTTGAGG ACGGTGTGCCAACTAAAACTCATGTGCTCAACGTGCTGCACCGCCTGATTGACGGCAAGGCGCCACCGGCACCAACGATC GATGCCCCGCAGGCCCTGCGCCTTAGCACGGAGCCCAAAGCCGATGTAGGCCGCTACGACACGCTGAGGGAGCTGCGTCA TGCGTCATGA Protein sequence : MIDMDLLSVIRRWHFRQGMAIREIKRRTGLSRNTIRKYLRADAVEPVFKVPDRPSKLDPFSEKLTGWLRVESGKSRKQKR TAKQLYADLVTLGYDGSYARVAAFARDWKRDRQYEQQTSGRGTFVPLVFQPGEAFQFDWSEDYAVLGGKQVKLQVAHTKL SHSRAYIVRAYLLQTHEMLFDALTQAFRVLGGIPQRGIFDNMKTAVDKIGRGKARQVNARFAALASHYLFETDFCNPASG WEKGQVEKNVQDARHRLWQPMPSFPDLAALNAWLEEQCVAQWAEIQHGTLPGTIADVHAEEVISLMPMGRPFDGFVEQTK RVSPTCLIAFERNRYSVPASFANRPVSLRVYPERLVIVAEGQVLCEHERIIDRSHQKPGRTIYDWRHYLAVVQRKPGALR NGAPFLEMPEAFRQLQTQLLKRLGGDKEMVEILSLVLHHDEQSVLCAVELALEDGVPTKTHVLNVLHRLIDGKAPPAPTI DAPQALRLSTEPKADVGRYDTLRELRHAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 3e-157 | 60 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 1e-110 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 3e-92 | 43 |
