Gene Information

Name : Sala_0399 (Sala_0399)
Accession : YP_615454.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 408303 - 409688 bp
Length : 1386 bp
Strand : +
Note : -

DNA sequence :
GTGGCCAAGGTTCGGGCGATCAATGCCGACCTGTTGGCGCGCAACGCCTATCTCGAGTTGATGAATGAGAAGATGCGCCG
TGACAAATTTGGCGCGAGCTCCGAGCGTAGCCGCCGCCTGCGCGACCAATTGGAGCTGACCTTCGAGGAACTCGAGGCGA
ATGCCAGCGAAGCCGAACTCCTCGGGCAGATTGCAGCCGCAAAGACCACGGCGGTCACTGCCTTCACCCGCAAGCGGACC
ACGCGCCGGGACTTGCCCGCTGACCTGCCGCGCGAGAAGGTCGTGATCCCGGCCCCCCAGGCTTGCCCGTGCTGCGGCTC
TCACGATCTGGGCCATCTGCCCGCCGACATCACCGAAACGCTCGAGCGGGTACCCGCCCGTCACAAGGTCATCCAGACGG
TGCGGGAAAAAGTCTCGTGCCGTCAGTGCGAGAAGATCAGCCAGCCTCCGGCACCCTTCCACGTTACTCCGCGCGGGATG
TTCGGGCCACACTTCCTGGCCAACCTCGCCTTCCAGAAATACGGTCTGCACCAGCCCCTCAACAGCCAGCGCGATCGTCT
CGAGCGCGAAGGCATTCCCTTGAGCCTCTCGACGCTGGCCGATCAGATCGGCGCGATCTGCGTGGCCGTGAAGCCCCTGT
TCCTGCTTCTCGAAGCCCACGCCCTGTCCGCCGATCGGCTTCATGCCGACGACACCACGGTCCCACTTCTGGCCAAGCTC
AAGACCGAGGTGGCCAGGATCTGGGACTATGTGCGGGATGATCGGCCCTTCGGCGGCCCCGCGCCACCGGTTGCGCTCTG
CTACTACTCACGCAACCGCAAGGGAGAGCATCCGCGAGCGCACCTGGCCGGCTACAGCGGCATCCTGCAGGTCGACAAGT
TTGCCGGCTTCAATGACCTGTTCCGCGAGGGGCGGGGCGAAAAGCCGATGACGCGTGCGAACTGCTGGGCGCATAGCCGA
CGCGAGTTCTTCAAGCTCGTCGACATCAGGCAGCAGATGAAGCGCAGGAATGCCGTCGCCCCGCTCATCTCGCCCTTGGC
TAGCGAGGCGTTGGAACGGATTGACCGGCTCTTCGCCATCGAGCGTGACATCAACGGAAAGCGCGCTGCCGAGCGCCTGG
CCGTCCGTCAGGAGCAGTCGGCACCGATCGTCGTCGACCTGGAAAGCTGGATGCGCGAAACCCGCGCCAGCCTCTCGCGT
CATGATGCCGTGACCAAGGCGATCAACTACTTCCTCAACGACTGGGAGGGCTTCACCACATTCCTCGCCGATGGTCGGAT
CTGCTTGACCAACAACTCCGCCGAGCGCGAGCTTCGCGCCGTGGCGCGAGGCAGGAAGGCATGGCTCTTCGTGGGTTCGG
ATCGGGCGGTGAGCGCGCGGCGATGA

Protein sequence :
MAKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAELLGQIAAAKTTAVTAFTRKRT
TRRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITETLERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGM
FGPHFLANLAFQKYGLHQPLNSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKL
KTEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDLFREGRGEKPMTRANCWAHSR
REFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAIERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSR
HDAVTKAINYFLNDWEGFTTFLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-60 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-66 44
tnp AEA34686.1 transposase Not tested Not named Protein 1e-66 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-66 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-66 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-66 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-66 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-66 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-66 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 8e-66 44
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-66 44
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-65 43
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-65 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_0399 YP_615454.1 transposase IS66 VFG1700 Protein 1e-60 45
Sala_0399 YP_615454.1 transposase IS66 VFG0793 Protein 2e-66 44