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Name : Sala_0316 (Sala_0316) Accession : YP_615372.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 324333 - 325826 bp Length : 1494 bp Strand : + Note : - DNA sequence : GTGAGCGACAGCGAACCGGCCGCGCCCGCAGCGGCGCCGGTCGACATCCCCTATGGCTTTGCGCGCGCACACGGTGTCGT CATCGCGCCGGGCGAGGAGGGCGTCTGGCTCGCGACCCTGCGCGAAGGCAGCGATCCGGCGGTGCTGATCGAGGTCAAGC GCCACCTCGCGCAGCCGCTGCGCGTCGCGACCGCCGATGCGGCCGATTTCGACCGGCTGCTGTCCGATCATTATGCGGTC GACAGCTCGGCCGCGGCGATGGCGGGGTCGGTCGGCAGCGACGGGCTCGACCTCGGCATCCCCAGCGCCGAAGACCTGCT CGACAGCGCCGACGACGCCCCCGCGATCCGCCTCATCAACGCGATCATCGCCGAAGCGGTGCGGCAGGGGGTCAGCGACA TTCATATCGAACCCTATGAAAGCGGGCTGGTCGTGCGGATGCGCGCCGACGGCGTGCTGCGCGAGCATCTCAGGATGCCG CCGCACGTCGCCCCCGTCGTCGTCAGCCGTATCAAGGTGATGGCGCGGCTCGACATCGCCGAACGCCGCGTGCCGCAGGA CGGCCGCATCGGGCTGACGCTCGCGGGGAAAGCGGTCGATGTGCGCGTCTCGACCTTGCCGAGCCGCGCGGGCGAGCGCG TGGTGATGCGTATCCTCGACAAGGACGCCGCCGGGATCGACTTCGACATACTCGGCCTGTCTGGCGAGGCGGACCGGATC TTGCGCGAGGCGCTGGCCGAACCCAATGGCATCATCCTCGTCACCGGGCCGACCGGATCGGGCAAGACGACGACGCTCTA TGCGGCCTTGAAGCAATTGAACGACGGGCAGCGCAATATCCTGACCGTCGAAGACCCGGTCGAATATGCCGTTGACGGCG TGGGTCAGACGCAGGTGAACAGCAAGGTCGGGCTCGACTTTGCCGCGGGTCTGCGCGCGATCCTGCGCCAGGACCCCGAT GTGGTGATGGTCGGCGAAATCCGCGACCGCGAAACCGCCGACATCGCGGTGCAGGCCTCGCTCACCGGCCATCTCGTGCT CTCGACCGTCCACACCAATGATGCGGTGGGGGCGATCACGCGCCTGAAAGATCTGAAGGTCGAACCCTTCCTGCTCGCCT CGACGCTGCGCGCGGTGATCGCGCAGCGGCTGGTGCGCAAGCTCTGTGACAATTGCCGCGAGCCGGTGCAGGCCGACAAC AGCATTGCCGCGATGCTGGGGCTCGACATCGGCACCGTGATCTGGCGGCCCAAGGGCTGCGAGGCGTGCGGGGGCACGGG CTTCAAGGGCCGCATCGGCGTGTTCGAGGCGATCAAGGTCGACGACACGGTGCGCCGCTATATCTATGCGGGTGGCGACG AGGCGATGATCGCGAAGCACGCCTTTCTGAAATCGCCGACGCTGGCGTCCGCAGCGCGGACGATGGTCGCGAAGGGACTG ACGACCGCCGAGGAAGCGATCCGCGTCGCGCGGCGCGAGGATGTCGATGCCTGA Protein sequence : MSDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPLRVATADAADFDRLLSDHYAV DSSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLINAIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMP PHVAPVVVSRIKVMARLDIAERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRI LREALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVNSKVGLDFAAGLRAILRQDPD VVMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAITRLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADN SIAAMLGLDIGTVIWRPKGCEACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGL TTAEEAIRVARREDVDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-100 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-100 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sala_0316 | YP_615372.1 | type II secretion system protein E | VFG0182 | Protein | 1e-109 | 53 |
| Sala_0316 | YP_615372.1 | type II secretion system protein E | VFG2048 | Protein | 4e-101 | 52 |
| Sala_0316 | YP_615372.1 | type II secretion system protein E | VFG1876 | Protein | 5e-105 | 51 |
| Sala_0316 | YP_615372.1 | type II secretion system protein E | VFG2426 | Protein | 7e-78 | 49 |
