Gene Information

Name : Sala_2776 (Sala_2776)
Accession : YP_617814.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Resistance
Product : major facilitator superfamily transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 2932398 - 2933636 bp
Length : 1239 bp
Strand : +
Note : -

DNA sequence :
GTGACGGCTACGCGCACCATTCCCTTCATCGTCGTCACCATCTTCATCGACGCGGTCGGATTCGGCATCATCATGCCCGT
GCTGCCGCAGCTGGTGATGGAGGTCGGGCAGATCGACCTGCCCCACGCGATCGAGGTCGGCGCGTGGATCGGGCTGGTGA
TGGCGGTCGCGACCTTCCTTGCCTCGCCGGTGCTCGGCAACCTCTCCGACCGGTTCGGGCGGCGGCGCATATTGCTCCTC
GCGCTCGGCGGGCTCGCGGTCGATTATGCGCTGTTGACGGTGGTCGAGACGCTGCCGTGGCTGTTCGTCGCGCGCGCGCT
GTCGGGGATCTTCGGCGGCAGCTATGCCGCGGCGCAGGCGGCGATCGCCGACATCACCCCGCCGGAGGAACGCGCGCGCA
ACTTCGGCTTCGTCGGCGCGGCGTTCGGCGTCGGCTTTGTCGCCGGCCCCGCCATCGGCGGCTTCCTGGGCGAGATGAGC
CCGCGCGCGCCCTTTGTCGCCGCGGCGATCCTCGCCACCGCGAACATGCTCTATGGCTATTTCATCTTCCCCGAAACGCT
GCCGAAAGAGCGCCGCCGCGCCTTCGACTGGCGCCGCGCCAATCCGCTCGGCGCATGGAAGATGATGCGCGCGCTGCCCG
GAATGGACGGTGTGGCGGGCGTGCTCGTGCTGTGGCAGATCGCCAGCCTCGTCTATCCGATGACGTGGAGCTTTTACTGT
ATCGCGCAGCTAGGCTGGTCGCCGGGGATGATCGGCGCCAGCCTCGCCGCGGTGGGGGTGATGATCGCGCTGGGCCAGAT
GTTCGTCGTCGGTCCCGCGGTCGCGCGCTTTGGCGAGCGCGACGCGGCGACGTTCGGCCTCCTCGTCGCGGTGGCGGTCT
ATATCGGCTATGCCTTCACCACGTCGACGCTCGGCGCCTTCCTGCTGCTCATCCCCATTGCGTTGCAGGCGCCGGTGCAA
CCGTCGCTGATGGCGATGATGTCGCGCCGCGCCACCGCCGATACGCAGGGTGAAGTGCAGGGGGTTTCGGCGATGGCGAT
GGGACTGGGTCAGCTTGCCGCGCCGATGCTGTTAACGGGCACGATGGCCTATTTCACCGCCGACGCCGCCCCGGTGCATT
TCCCCGGCGCGGCGTTCCTCGTCGCCGCGATTTTCGGACTGCTGGCGATCGCGATGCTGCGCCGCCTGCCGCGCGCCACG
CAAACCGCGGATCAGATGCCGCCGTCGGTGACCGCATAG

Protein sequence :
MTATRTIPFIVVTIFIDAVGFGIIMPVLPQLVMEVGQIDLPHAIEVGAWIGLVMAVATFLASPVLGNLSDRFGRRRILLL
ALGGLAVDYALLTVVETLPWLFVARALSGIFGGSYAAAQAAIADITPPEERARNFGFVGAAFGVGFVAGPAIGGFLGEMS
PRAPFVAAAILATANMLYGYFIFPETLPKERRRAFDWRRANPLGAWKMMRALPGMDGVAGVLVLWQIASLVYPMTWSFYC
IAQLGWSPGMIGASLAAVGVMIALGQMFVVGPAVARFGERDAATFGLLVAVAVYIGYAFTTSTLGAFLLLIPIALQAPVQ
PSLMAMMSRRATADTQGEVQGVSAMAMGLGQLAAPMLLTGTMAYFTADAAPVHFPGAAFLVAAIFGLLAIAMLRRLPRAT
QTADQMPPSVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 5e-25 41
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 5e-25 41
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 7e-25 41
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_2776 YP_617814.1 major facilitator superfamily transporter X75761.gene.p01 Protein 9e-25 41
Sala_2776 YP_617814.1 major facilitator superfamily transporter AY264780.2.gene3.p01 Protein 4e-28 41