Gene Information

Name : Sala_2460 (Sala_2460)
Accession : YP_617500.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 2602385 - 2603017 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGGATAAGCGCCTCATTCATCTGGTCGATGACGAAGAGGCCATCCGGAAGTCAGCCGGATTCATGCTGCGGACGGT
GGGGTTCGAGGTACGGACCTATGCGAGCGGCGTGGAATTTCTGAAGCTGGCACGCACGGCCGAGACTGGATGTGTGCTTC
TCGACGTTCGCATGCCTGAGTTAGATGGGCTTCAGGTCCAGTCGGAAATGGCGCAGCGCGGCATCAATATGCCGGTCGTC
GTCCTGACCGGTCATGGCGACGTCACTCTCGCGGTGCAGGCGATGAAGGCGGGCGCAGTGGATTTTATCGAGAAACCCTT
CGAGAAGGCATCGCTGCTTGAGGCTATCGACCGCGGATTCGCGCGTATCGACCGGGTCGATGTCCGAGCGACGGAAGAAG
CCGAAGCGCAGGTCCGGATCGGCGTCTTGACGCCCCGCGAGAAGGAGGTTCTCGATGGGCTCGCGCGAGGCTATCCCAAC
AAGACCATCGCCTATGATCTAGGCGTTTCTTCGCGAACCGTCGAAGTCCACCGGGCAAGCCTGATGAGCAAGTTGGCTGT
CCGCAGTCTTTCCGATGCGCTCCGGATTGCATTTGCTGCGGGCCTTGGTCGCAGCGAAGCCAAACTGGGATGA

Protein sequence : 
MQDKRLIHLVDDEEAIRKSAGFMLRTVGFEVRTYASGVEFLKLARTAETGCVLLDVRMPELDGLQVQSEMAQRGINMPVV
VLTGHGDVTLAVQAMKAGAVDFIEKPFEKASLLEAIDRGFARIDRVDVRATEEAEAQVRIGVLTPREKEVLDGLARGYPN
KTIAYDLGVSSRTVEVHRASLMSKLAVRSLSDALRIAFAAGLGRSEAKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-31 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-31 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-31 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-31 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_2460 YP_617500.1 two component LuxR family transcriptional regulator VFG0488 Protein 1e-31 41