Gene Information

Name : Sala_2454 (Sala_2454)
Accession : YP_617494.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2594978 - 2596498 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGAACAGGCCTTCAGCACCATCAATGCCGCGCCGTCCTTCCGGCATCGCTATGACAATTTCATCGGTGGTCGTTG
GAGTCCCCCCGCTGCGGGAGAATATTTCGCCGATACGAGCCCGATCAACGGCGCCCTGATCGCCGAGTTCGCGCTGTCAA
CACCGGAAGATGTCGAGCGCGCGCTCGATGCGGCGCACGCGGCCAAGGATCAGTGGGCCAAGATATCACCAGCCGAGCGT
GCGCGGTTGCTCAACCGGATCGCCGACCGGCTGGAAGACAATCTGGAGCTGCTGGCCTTCGCCGAGACGATCGACAACGG
CAAGCCGATCCGCGAGACGCGTACCGCAGACGTGCCTCTGGCGATCGACCACTTCCGCTACTTCGCCGGCTGCATCCGGG
CGGAAGAGGGCGCGATCTCGACGATCGATGCCGACACGATCGCCTATCATTTCCGCGAGCCGCTTGGCGTCGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTCATGGCAGCCTGGAAAATCGCTCCGGCACTTGCCGCGGGCAATTGCACGGTGAT
CAAACCTGCGTCCCAGACGCCTTTGACATTGCTGATGTTCGCAGAGCTCACCGCCGATATTCTGCCGCCTGGCGTGTTCA
ACGTCGTGACGGGACCTGGACGGACCGTTGGCCAGGCGATCGCCGCCAATCCACGGATCGCCAAGGTCTCCTTTACGGGC
GAGACGGTCACCGGCAAGCAGATCATGCATGCGGCCGCCGACCATCTCATCCCCCAGACGATGGAACTTGGCGGCAAGTC
GCCCAACATCTTCATGGCCGACGTGCTCGACGAGGAGGACGCCTTCTTCGACAAGGCGCTGGAGGGCTTCACGCTCTTCG
CGTTCAACAAAGGCGAGGTCTGCACCTGTCCCTCGCGCGCGTTGATCCACGAATCGATCTTCGACCGTTTCATCGAGCGC
GCCGTGGCGCGTGTCACAGCGATCCGCCAAGGCGACCCGCTCGACCCTTCGGTCCAGATCGGCGCCCAGGCGTCCGAAGA
TCAGCTCCACAAGATCCTCGGCTATATCGACATCGGAAAAGCCGAGGGTGCGCAATGCCTGACCGGCGGCGCGCGGGCGC
TCCCCGGCGGCGAACTCGATCGGGGCTATTTCGTGCAGCCCACCGTGTTCCTCGGCGAAAATCGGATGCGCATCTTCCAG
GAAGAGATCTTCGGGCCGGTGCTGTCGGTGACCACATTCAAGACAGTCGACGAGGCGATCGCGATCGCCAACGATACCGC
CTACGGCCTCGGCGCGGGCGTCTGGACCCGCAACGGCAACACGGCCTACCGGCTCGGCCGCGCGATCGAGGCCGGGCGGG
TCTGGACCAACTGCTACCATCACTATCCCGCACATGCCGCTTTCGGCGGATATAAGGCGTCGGGTTTCGGACGCGAAAAT
CACAAGATGATGCTCGACCATTATCAGCAGACCAAGAACCTGCTCGTCTCCTATGACGAGCATGCGCTCGGCCTGTTCTG
A

Protein sequence :
MFEQAFSTINAAPSFRHRYDNFIGGRWSPPAAGEYFADTSPINGALIAEFALSTPEDVERALDAAHAAKDQWAKISPAER
ARLLNRIADRLEDNLELLAFAETIDNGKPIRETRTADVPLAIDHFRYFAGCIRAEEGAISTIDADTIAYHFREPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCTVIKPASQTPLTLLMFAELTADILPPGVFNVVTGPGRTVGQAIAANPRIAKVSFTG
ETVTGKQIMHAAADHLIPQTMELGGKSPNIFMADVLDEEDAFFDKALEGFTLFAFNKGEVCTCPSRALIHESIFDRFIER
AVARVTAIRQGDPLDPSVQIGAQASEDQLHKILGYIDIGKAEGAQCLTGGARALPGGELDRGYFVQPTVFLGENRMRIFQ
EEIFGPVLSVTTFKTVDEAIAIANDTAYGLGAGVWTRNGNTAYRLGRAIEAGRVWTNCYHHYPAHAAFGGYKASGFGREN
HKMMLDHYQQTKNLLVSYDEHALGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-142 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-147 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-147 59
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_2454 YP_617494.1 aldehyde dehydrogenase VFG0082 Protein 4e-142 60