Gene Information

Name : Sala_2391 (Sala_2391)
Accession : YP_617433.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2523934 - 2526513 bp
Length : 2580 bp
Strand : +
Note : -

DNA sequence :
ATGAACCTCGAAAAATTCACCGACCGCGCCAAGGGCTTTTTGCAGGCGGCGCAGACGATCGCGATCCGCATGAATCATCA
GCGGATCAGCCCCGAACATATCGCCAAGGCGCTGCTCGAAGACAGTCAGGGCATGGCCGCCGGGCTGATCGCCAACAGCG
GCGGCGACACCGCACGTGCGGTGGCGGGTATCGACGCGCTGCTCGCCAAGCTGCCCGCGGTGTCGGGATCGGGCGCGCAG
GCGACGCCGGGGCTCGACAACGACGCGGTGCGCCTGCTCGACCAGGCCGAACAGGTCGCCGCAAAGGCCGGCAGCGAATA
TGTCGCGGTCCAGAATATCCTCCTCGCCATGGTGCTGGCGCCCAGCACCCCGGTCGGCAAGGCCTTCGCCGACGCGGGCG
TATCCGCAGACGCCTTGAACGCGGCGATCGCCAAGCTCACCGGCGGTCGCACCGCCGATACCGCATCGGCCGAAGATCGC
TATGACGCGCTCAGGAAATTCGCCCGCGACCTCACCGAGGTAGCGCGCGAGGGCAAGCTGGATCCCGTGATCGGCCGCGA
CGAGGAAATCCGCCGCACGGTGCAGATCCTTGCGCGCCGCACCAAGAACAATCCCGTGTTGATCGGCGAGCCGGGCGTCG
GCAAGACCGCGATCGCCGAGGGCCTTGCGCTGCGCATCGTCAACGGCGACGTGCCCGACAGCCTGAAGGACCGCCGTCTG
CTCGCGCTCGACATGGGCGCGCTGATCGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTCAAGGGCGTGCTCGA
CGATGTGAAGGCCGCCGAGGGCGAGATCATCCTCTTCATCGACGAAATGCACACGCTCGTCGGCGCGGGAAAATCCGAAG
GCGCGATGGACGCCTCGAACCTGCTCAAGCCCGCGCTCGCGCGCGGCGAGCTCCACTGCATCGGCGCGACGACGCTCGAC
GAATATCGCAAGCATGTCGAAAAGGATCCCGCGCTCCAGCGGCGCTTTCAGCCGGTGTTCGTCGGCGAACCAACGGTCGA
GGATTCGATCTCGATCCTGCGTGGGATCAAGGAGAAATACGAGCTGCACCACGGCGTGCGCATCACCGACGGCGCGATCG
TCGCCGCGGCGACGCTGTCGCACCGCTATATCTCCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATGGACGAGGCG
GCGAGCCGCATCCGCATGGAGGTCGAATCGAAGCCCGAGGAGATCGAGACGCTCGACCGCCGCATCATCCAGATGAAGAT
CGAGGAAGCCGCGCTCGGCAAGGAAAGCGACGCGGCGTCGAAGGACCGGCTCGCGAGCTTGCAGGCCGAGCTTGCCAATC
TCGAACAGCAGTCGGCCGAACTCACCCAGAAATGGCAGGCCGAAAAGGAGAAGATCCACGCCGAGGCGAAGATCAAGGAA
GAGCTCGACGCCGCGCGCTCGGCGCTTGAACAGGCGCAGCGCGCGGGCGACCTCGCGAAGGCGGGCGAGCTAAGCTATGG
CACCATCCCCGCGTTGGAAAAAAGACTTGCCGAGGCCGAGGCCGCATCGGGCAATGCAATGCTGCGCGAGGAAGTCACCG
CCGACGACATAGCAGCGGTGGTCAGCCGCTGGACCGGCATCCCCGTCGACCGGATGATGGAGGGCGAGCGCGAGAAGCTG
CTCAAGATGGAGGAGACGCTGACCCAGCGCGTGATCGGCCAGGACGAGGCCGTCCGCGCGGTCTCGACAGCGGTCCGCCG
CGCGCGCGCCGGGCTTCAGGACCCGAATCGCCCGCTCGGCAGCTTCCTCTTCCTCGGCCCCACGGGCGTCGGCAAGACCG
AGCTGACCAAGGCGCTCGCGCGCTTCCTGTTCGACGACGACAATGCGATGGTGCGCATCGACATGTCCGAATATATGGAA
AAGCACAGCGTCGCGCGGCTCGTCGGCGCGCCGCCGGGCTATGTCGGCTATGAGGAGGGCGGCACGCTCACCGAAGCGGT
GCGCCGCCGCCCCTATCAGGTCGTCCTCTTCGACGAGGTCGAAAAGGCGCATGGCGACGTGTTCAACATTCTGCTCCAGG
TGCTCGACGACGGGCGGCTCACCGACGGGCAGGGGCGGACGGTCGATTTCACCAACACGCTCATCATCCTGACCTCGAAC
CTCGGCAGCCAGGCGATCGCCGCGCTCCCCGATGGCGCCCCGGTCGAACAGGCCGAACCTGCCGTCATGGAGGTTGTGCG
CGCGCATTTCCGGCCCGAGTTCCTGAACCGGCTCGACGAGATCGTGCTCTTTCACCGTCTGGGGCAGGAACATATGGGCG
GCATCGTCGACATCCAGGTCGCGCGGGTGCAGAAGCTGCTCGACGACCGCAAGGTGACGCTCGACCTGACCGACGCAGCG
CGTGCCTGGCTCGGTCGCGTTGGCTATGACCCCGTCTATGGCGCGCGGCCGCTGAAGCGCGCGGTGCAGAAATATCTGCA
AGACCCGCTCGCCGATCTCATTCTGAAAGGCGAGGTCCGGGACGGCGCGACGATCAGGGTCGACGAGGGCGACGGCGGGT
TGATGCTGAGCACAGGCTGA

Protein sequence :
MNLEKFTDRAKGFLQAAQTIAIRMNHQRISPEHIAKALLEDSQGMAAGLIANSGGDTARAVAGIDALLAKLPAVSGSGAQ
ATPGLDNDAVRLLDQAEQVAAKAGSEYVAVQNILLAMVLAPSTPVGKAFADAGVSADALNAAIAKLTGGRTADTASAEDR
YDALRKFARDLTEVAREGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPDSLKDRRL
LALDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGKSEGAMDASNLLKPALARGELHCIGATTLD
EYRKHVEKDPALQRRFQPVFVGEPTVEDSISILRGIKEKYELHHGVRITDGAIVAAATLSHRYISDRFLPDKAIDLMDEA
ASRIRMEVESKPEEIETLDRRIIQMKIEEAALGKESDAASKDRLASLQAELANLEQQSAELTQKWQAEKEKIHAEAKIKE
ELDAARSALEQAQRAGDLAKAGELSYGTIPALEKRLAEAEAASGNAMLREEVTADDIAAVVSRWTGIPVDRMMEGEREKL
LKMEETLTQRVIGQDEAVRAVSTAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEYME
KHSVARLVGAPPGYVGYEEGGTLTEAVRRRPYQVVLFDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFTNTLIILTSN
LGSQAIAALPDGAPVEQAEPAVMEVVRAHFRPEFLNRLDEIVLFHRLGQEHMGGIVDIQVARVQKLLDDRKVTLDLTDAA
RAWLGRVGYDPVYGARPLKRAVQKYLQDPLADLILKGEVRDGATIRVDEGDGGLMLSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_2391 YP_617433.1 ATPase VFG2084 Protein 5e-111 44
Sala_2391 YP_617433.1 ATPase VFG2076 Protein 3e-119 44