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Name : Sala_2370 (Sala_2370) Accession : YP_617412.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2492752 - 2494644 bp Length : 1893 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGGCCGACATCGACAGCCGCCTCGACACGACGCAAGCCACCCCCATCGGCGTCACCACCGGGCCGATCCGCGGCAGCCG CAAGATCCACGTCGCCAGCCCCACCGGCAGCGGCATCCGCGTCGCGATGCGCGAGATCCTGCTCGAACCCTCATCGGGCG AACCGCCGGTGCGCGTCTACGACACCAGCGGGCCTTATACGGACCCCGATGCGACGATCGACATCGCCCAGGGCCTCCCC GAACTGCGGGCAAGCTGGATCCGCGCCCGCGGCGACGTCGAAGAGGTGGCCCAGCGCGAGGTTCGGCCGGAGGACAACGG CCAGCTCGGCCCCGACCGTTCGGGCGGCGTCCCCGCCTTCCCCAATGTCCGCAAGAAAGTGCTGCGCGCCAAGCCCGGCG CGAACGTCAGCCAGATGCACTATGCCCGCCGCGGCATCATCACGCCCGAGATGGAATATGTCGCGACGCGCGAGAATCTC GGCCGCGAACGGCTCGCCGAATATGTCCGCGACGGGCAGGACTGGGGCGCCAGCATCCCCGACTATGTCACCCCCGAATT CGTCCGCGACGAGGTCGCGCGCGGCCGCGCGATCATCCCCAGCAACATCAACCACCCCGAAAGCGAGCCGATGGCGATCG GCCGCAACTTCCTCGTCAAGATCAACGCCAATATCGGCAACAGCGCGGTCGCCAGCGACGTCGCGGCCGAGGTCGACAAG ATGGTCTGGTCGATCCGCTGGGGCGCCGACACCGTCATGGACCTGTCGACCGGGCGCAACATCCACGACACGCGCGAATG GATCCTCCGCAACTCGCCCGTCCCGATCGGCACCGTCCCCATCTATCAGGCGCTCGAAAAGGTCGGCGGCATCGCCGAGG AACTGACGTGGGAAATCTTCCGCGACACGCTGATCGAACAGGCCGAACAGGGCGTCGACTATTTCACCATCCATGCGGGT GTCCGTCTGCCTTACGTGCCCCTCGCCGCGAAGCGCGTCACCGGCATCGTCAGCCGCGGCGGCAGCATCATGGCGAAATG GTGCCTCGCGCATCACAGGGAAAGCTTCCTCTACGACCATTTCGACGAGATTACCGAGATCATGAAGGCCTATGACATCG CCTACAGCCTCGGCGACGGCCTGCGCCCCGGCAGCATCGCCGACGCGAATGACGAGGCGCAGTTTGCCGAGCTCTACACG CTGGGCGAGCTTACCAGGCGCGCGTGGGCACAGGATGTGCAGGTGATGATCGAGGGACCGGGGCATGTTCCCATGCACAA GATCAAGGAGAATATGGACAAGCAGCTCGAGGCCTGCGGCGAGGCGCCCTTCTACACCCTGGGGCCGCTCACCACCGACA TCGCGCCCGGCTACGACCATATCACCAGCGGCATCGGCGCCGCGATGATCGGCTGGTACGGCACCGCGATGCTTTGCTAC GTCACGCCCAAGGAGCATCTGGGCCTGCCCGACCGCGACGATGTGAAGGTCGGCGTCGTCACCTACAAGCTCGCCGCCCA CGCCGCCGACCTCGCCAAGGGCCACCCCGCCGCGCAGGTCCGCGACGATGCGCTGTCAAAGGCGCGCTTCGAGTTCCGCT GGCGCGACCAGTTCAACCTGTCGCTCGACCCCGACACCGCCGAGCAATATCACGACCAGACCCTCCCCGCCGAGGGCGCC AAGACCGCGCATTTCTGCAGCATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCAGCCAGGAGGTGCGCGAGTTCGCGAA GCTGCAAAATCAGGACAGCGCCGGTTTCATCGCGGCAGAAGAGGCCGAAAAGGGCATGGCGGAAATGAGTCAGGTCTATG AGGACACGGGGCGCGAGCTGTATATGGGCGCTGGTGGGCGCGAGCATGATTGA Protein sequence : MADIDSRLDTTQATPIGVTTGPIRGSRKIHVASPTGSGIRVAMREILLEPSSGEPPVRVYDTSGPYTDPDATIDIAQGLP ELRASWIRARGDVEEVAQREVRPEDNGQLGPDRSGGVPAFPNVRKKVLRAKPGANVSQMHYARRGIITPEMEYVATRENL GRERLAEYVRDGQDWGASIPDYVTPEFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDK MVWSIRWGADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEELTWEIFRDTLIEQAEQGVDYFTIHAG VRLPYVPLAAKRVTGIVSRGGSIMAKWCLAHHRESFLYDHFDEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYT LGELTRRAWAQDVQVMIEGPGHVPMHKIKENMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCY VTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGA KTAHFCSMCGPKFCSMKISQEVREFAKLQNQDSAGFIAAEEAEKGMAEMSQVYEDTGRELYMGAGGREHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 69 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
