Name : Sala_1651 (Sala_1651) Accession : YP_616697.1 Strain : Sphingopyxis alaskensis RB2256 Genome accession: NC_008048 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1732973 - 1735078 bp Length : 2106 bp Strand : - Note : - DNA sequence : GTGCAAGTTGGCAAAGCTCGCGCTAAACACCGATCACCGATGCGACCCGAAATCCTCAATCCACTCTTTGCCGCGCTCAC TGACCTGAAAGGTGTCGGGCCGCAACTCGCCAAGCCACTGACGCGGCTTGGGCTGGAGCGCCTCGTCGATGTGCTGTTCC ATCTGCCGACGGGACTCATCTCGCGCATCGCCGTCGAGCGGCTCGATCAGGCGCAGCCCGGACAGACGATCATCGTCGAT CTGACCGTGCAGGATTATCGTCCCGGCCGCAGCCCGCGTGCCCCGTTCGGCGTCGAGGCGTTCGATCGCGCGGGCGATCA TGTGCGGCTCGTCTATTTCGGGCGGACATCGGGGCTGGCGCGCAAGCTGTTCCCGCTGGGCGAGACGCGCCGCGTGTCGG GGCGGCTCGACCTGTACGGCGACATGCGCCAGATCGTCCATCCCGACCATGTCGCCGAACCCGGCGACGAAGGCGCGATA GCTGAGCATGAGCCCGTCTATCCGCTGACCGAAGGCCTCACCAACGCGCGGCTGTCGCAGCTTGCCGCGATCGCGCTCGA CCGGCGCCCCGACCTCGCCGAATGGATCGACGCGCCCCTGCTCGCGAGCCGCAACTGGCCCGACTGGCGCGAGGCGGTGG CGCGCGCGCACGCCAACCCGCGCGACGAGGCCGCGCGCGACCGGCTCGCCTATGACGAGATTTTCGCCAATCAGGTCGCG CTGATGCTGATCCGGCAGGGGCTGCGCAACCGCAGGGGGCGCGCGATCGTCGGTGACGGCCGCCTGACCGGCGCGCTACG CCTGCCGTTCGGGCTCACGGGGGCGCAGGAGCGCGTCGGGCGCGAGATTGCGGGCGACATGGCGCAGGACACGCCGATGC TGCGGATGCTGCAGGGCGATGTCGGGTCGGGCAAGACGCTGGTGGCGCTGCGTGCGATGCTGACCGCGGTCGAAGCGGGG ACGCAGGCGGCGCTGCTCGCGCCGACCGAAATCCTGGCGCGCCAGCATCATGCGACCTTGCGGGCGATGCTCGCGGGCCT GCCGGTGAACCTCGCCATCCTGACCGGGCGCGACAAGGGGCGGGTGCGCGAATCGACGCTGATGGGCCTCGCCGACGGCA GCATCGACATATTGATCGGCACCCATGCGATTTTTCAGCAGGCGGTGACATACAGGGATCTCGCGCTCGTCGTCGTCGAC GAACAGCATCGCTTCGGCGTCGCGCAGCGGTTGATGCTGACGCAAAAGGCGGCGCGGCCGCCGCACCTGCTGGTGATGAC CGCGACGCCGATCCCGCGCACCCTGCTGCTCGCCAATCATGGCGAAATGGACGTGTCGCGGATCGACGAGATGCCGCCGG GGCGCACCCCCGTCGACACGCGCGTCGTGTCGGTCGAGCGGCTCGACGAGGTGATCGCCTCGCTCGAACGCCATCTCGCG ACGGGCGCGCAGGCCTATTGGGTGTGCCCGCTCGTCGCCGAAAGCGAGGCAAGCGAGCTGGCGGCGGCCGAGGCCCGCGC CGCGCTGCTCGCCGAGCGGCTGGGCGCGGCGCGCGTCGGGCTGGTCCACGGGCGGATGAAAGGGCCCGAAAAGGATGACG TCATGGCGCGCTTCCAGTCCGGCGCGATCGGCGTGCTCGTCGCCACGACCGTGATCGAGGTGGGCGTCGATGTCCCTGCC GCCAGCCTGATGGTCGTCGAACATGCCGAGCATTTCGGCCTCGCCCAGCTGCACCAGCTGCGCGGTCGCGTCGGGCGCGG CGCAGCGAAATCGGTGTGCCTGCTGCTGCGGTCGCCGACTCTGTCGGAGACGGCGCGCGAGCGGCTGGCGCTGATGCGCG AGACCAACGACGGCTTCGTGATTGCCGAAAGGGATCTCGAACTGCGCGGCGGCGGTGAACTGCTGGGCCTCAAACAGTCG GGGGAGGCCGATTATCGGCTGGCGAGCCCCGAACAGCTGGTGCGCCTGCTCCCCGTCGCGCACGACGATGCGCGGCTGTT CGTCGAACGCGACGGCGGGATGGAGGGCGCGCGCGGCGAGGCGGTGCGGCTTTGTCTCTATCTCTTCGAACGCGATGCGG CGGTGCCGCTGCTACGGAGCGGGTAG Protein sequence : MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLISRIAVERLDQAQPGQTIIVD LTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLARKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAI AEHEPVYPLTEGLTNARLSQLAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGDVGSGKTLVALRAMLTAVEAG TQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKGRVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVD EQHRFGVAQRLMLTQKAARPPHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQSGAIGVLVATTVIEVGVDVPA ASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPTLSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQS GEADYRLASPEQLVRLLPVAHDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-123 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sala_1651 | YP_616697.1 | DEAD/DEAH box helicase | BAC0356 | Protein | 6e-93 | 45 |