Gene Information

Name : Sala_1651 (Sala_1651)
Accession : YP_616697.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Resistance
Product : DEAD/DEAH box helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1732973 - 1735078 bp
Length : 2106 bp
Strand : -
Note : -

DNA sequence :
GTGCAAGTTGGCAAAGCTCGCGCTAAACACCGATCACCGATGCGACCCGAAATCCTCAATCCACTCTTTGCCGCGCTCAC
TGACCTGAAAGGTGTCGGGCCGCAACTCGCCAAGCCACTGACGCGGCTTGGGCTGGAGCGCCTCGTCGATGTGCTGTTCC
ATCTGCCGACGGGACTCATCTCGCGCATCGCCGTCGAGCGGCTCGATCAGGCGCAGCCCGGACAGACGATCATCGTCGAT
CTGACCGTGCAGGATTATCGTCCCGGCCGCAGCCCGCGTGCCCCGTTCGGCGTCGAGGCGTTCGATCGCGCGGGCGATCA
TGTGCGGCTCGTCTATTTCGGGCGGACATCGGGGCTGGCGCGCAAGCTGTTCCCGCTGGGCGAGACGCGCCGCGTGTCGG
GGCGGCTCGACCTGTACGGCGACATGCGCCAGATCGTCCATCCCGACCATGTCGCCGAACCCGGCGACGAAGGCGCGATA
GCTGAGCATGAGCCCGTCTATCCGCTGACCGAAGGCCTCACCAACGCGCGGCTGTCGCAGCTTGCCGCGATCGCGCTCGA
CCGGCGCCCCGACCTCGCCGAATGGATCGACGCGCCCCTGCTCGCGAGCCGCAACTGGCCCGACTGGCGCGAGGCGGTGG
CGCGCGCGCACGCCAACCCGCGCGACGAGGCCGCGCGCGACCGGCTCGCCTATGACGAGATTTTCGCCAATCAGGTCGCG
CTGATGCTGATCCGGCAGGGGCTGCGCAACCGCAGGGGGCGCGCGATCGTCGGTGACGGCCGCCTGACCGGCGCGCTACG
CCTGCCGTTCGGGCTCACGGGGGCGCAGGAGCGCGTCGGGCGCGAGATTGCGGGCGACATGGCGCAGGACACGCCGATGC
TGCGGATGCTGCAGGGCGATGTCGGGTCGGGCAAGACGCTGGTGGCGCTGCGTGCGATGCTGACCGCGGTCGAAGCGGGG
ACGCAGGCGGCGCTGCTCGCGCCGACCGAAATCCTGGCGCGCCAGCATCATGCGACCTTGCGGGCGATGCTCGCGGGCCT
GCCGGTGAACCTCGCCATCCTGACCGGGCGCGACAAGGGGCGGGTGCGCGAATCGACGCTGATGGGCCTCGCCGACGGCA
GCATCGACATATTGATCGGCACCCATGCGATTTTTCAGCAGGCGGTGACATACAGGGATCTCGCGCTCGTCGTCGTCGAC
GAACAGCATCGCTTCGGCGTCGCGCAGCGGTTGATGCTGACGCAAAAGGCGGCGCGGCCGCCGCACCTGCTGGTGATGAC
CGCGACGCCGATCCCGCGCACCCTGCTGCTCGCCAATCATGGCGAAATGGACGTGTCGCGGATCGACGAGATGCCGCCGG
GGCGCACCCCCGTCGACACGCGCGTCGTGTCGGTCGAGCGGCTCGACGAGGTGATCGCCTCGCTCGAACGCCATCTCGCG
ACGGGCGCGCAGGCCTATTGGGTGTGCCCGCTCGTCGCCGAAAGCGAGGCAAGCGAGCTGGCGGCGGCCGAGGCCCGCGC
CGCGCTGCTCGCCGAGCGGCTGGGCGCGGCGCGCGTCGGGCTGGTCCACGGGCGGATGAAAGGGCCCGAAAAGGATGACG
TCATGGCGCGCTTCCAGTCCGGCGCGATCGGCGTGCTCGTCGCCACGACCGTGATCGAGGTGGGCGTCGATGTCCCTGCC
GCCAGCCTGATGGTCGTCGAACATGCCGAGCATTTCGGCCTCGCCCAGCTGCACCAGCTGCGCGGTCGCGTCGGGCGCGG
CGCAGCGAAATCGGTGTGCCTGCTGCTGCGGTCGCCGACTCTGTCGGAGACGGCGCGCGAGCGGCTGGCGCTGATGCGCG
AGACCAACGACGGCTTCGTGATTGCCGAAAGGGATCTCGAACTGCGCGGCGGCGGTGAACTGCTGGGCCTCAAACAGTCG
GGGGAGGCCGATTATCGGCTGGCGAGCCCCGAACAGCTGGTGCGCCTGCTCCCCGTCGCGCACGACGATGCGCGGCTGTT
CGTCGAACGCGACGGCGGGATGGAGGGCGCGCGCGGCGAGGCGGTGCGGCTTTGTCTCTATCTCTTCGAACGCGATGCGG
CGGTGCCGCTGCTACGGAGCGGGTAG

Protein sequence :
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLISRIAVERLDQAQPGQTIIVD
LTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLARKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAI
AEHEPVYPLTEGLTNARLSQLAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGDVGSGKTLVALRAMLTAVEAG
TQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKGRVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVD
EQHRFGVAQRLMLTQKAARPPHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQSGAIGVLVATTVIEVGVDVPA
ASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPTLSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQS
GEADYRLASPEQLVRLLPVAHDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-123 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1651 YP_616697.1 DEAD/DEAH box helicase BAC0356 Protein 6e-93 45