Gene Information

Name : Sala_1613 (Sala_1613)
Accession : YP_616659.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1694978 - 1695193 bp
Length : 216 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACCAGCTGAAAGTGCTGCGCGCGATGCGAAACTGGAGCCAGGCCGAACTGGCCGACCGGCTGGACGTATCGCG
GCAGGCGGTGAACGCGATCGAAACGGGCAAATATGACCCGTCGCTGCCGCTCGCATTCAAGCTGGCGCGGCTGTTCGACA
TGCCGATCGAGGAGATTTTCGACGATGGCCACAAGGGACAGGACGATGGCGAATGA

Protein sequence :
MNNQLKVLRAMRNWSQAELADRLDVSRQAVNAIETGKYDPSLPLAFKLARLFDMPIEEIFDDGHKGQDDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 51
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-09 51
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-09 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1613 YP_616659.1 XRE family transcriptional regulator VFG2168 Protein 1e-09 51
Sala_1613 YP_616659.1 XRE family transcriptional regulator VFG2175 Protein 1e-09 51