Gene Information

Name : Sala_1586 (Sala_1586)
Accession : YP_616632.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1662430 - 1662993 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAAAGAGTATTCGACCTGATGCTCGCTTCGCTTACTGTCATTCTGCTGGCCCCGTTGATGCTTTGCGTGGCGCT
TGCGATCCGTCTGGATTCGGCGGGGCCAGCGGTGTTCTGGTCGCAGCGTTTTGGCCGTGACGGGCGATTGTTCCTGATGC
CGAAGTTTCGGACGATGCACATCGACACCCCGCTGCTTCCGACACATTTGCTTCGGGACGGCGCGAGCCGGGTGACGCGC
CTTGGGCGCTTTTTGCGGCGCACCAGCCTTGATGAGTTGCCGCAGCTTTTCAGTGTTATCGCCGGAGACATGAGCCTGGT
GGGGCCCCGGCCAGCGCTATTCAACCAAGATGATCTGATGCGTTTGAGGGCGGAATGCGGCGTTACCGCGCTTCGGCCTG
GAATAACCGGCTGGGCGCAGATCAACGGCCGCGACGAACTTACGATCTCAGAGAAAGTGACGTTGGAGCGTGAATATCTG
GCTCGAATGAGCCTCGCCTTCGACGTAAAGATCCTGATCCTTACGATAGTGCGGGTTCTGGATCGCCGCAGCATTTCGCA
TTGA

Protein sequence : 
MIKRVFDLMLASLTVILLAPLMLCVALAIRLDSAGPAVFWSQRFGRDGRLFLMPKFRTMHIDTPLLPTHLLRDGASRVTR
LGRFLRRTSLDELPQLFSVIAGDMSLVGPRPALFNQDDLMRLRAECGVTALRPGITGWAQINGRDELTISEKVTLEREYL
ARMSLAFDVKILILTIVRVLDRRSISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-33 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1586 YP_616632.1 sugar transferase VFG1369 Protein 3e-32 45
Sala_1586 YP_616632.1 sugar transferase VFG1309 Protein 4e-36 42