Gene Information

Name : Sala_1563 (Sala_1563)
Accession : YP_616609.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1632372 - 1633565 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
TTGACGTCAGCAAAGGATTCGCCCGTGAAGATCGCCGTCGTCGGCACGGGTTATGTCGGCATTTCGAACGCGGTTCTGCT
GGCGCAGCATAATGCGGTCGTCGCGCTCGACATCGACACGCGCAAGGTCGAGCTCGTCAACGCGCGGCAATCGCCGATCG
TCGATCCCGAGATCGAGGATTATCTGGCCAACAAGCAACTGAACCTGGTTGCGACCACCGACAAGCAGGCGGCCTATGCC
GACGCGAACTTCGTCATCGTTGCAACGCCGACCGACTATGATCCCGACACCAATTATTTCAACACGAACAGCGTCGAAAG
CGTCATCGCCGACGCGCTGAAGCTGGCGCCCGGCGCGCTGGTCGTCGTCAAATCGACCGTCCCGGTGGGCTTCACCGAAC
GGATGCGCGCCGAACATGGCAGCAACGACATCGTCTTTTCCCCGGAGTTCCTGCGCGAAGGGCGCGCGCTCCACGACAAT
CTCCATCCGTCGCGGATCATCGTCGGCAACACGCACCCGCGCGCCGCCGATTTCGCGCGGCTGTTGCTCGAAGGGTCGCT
GAAGCCCGATACGGCCGTTCTCCAGACGGGGAACACCGAGGCCGAGGCGATCAAGCTGTTTGCGAACACCTATCTTGCGA
TGCGCGTCGCCTTTTTCAACGAGCTGGACACTTATGCCGCCTTGCACGGCGTCGATTCGCGGCAGGTGATCGAGGGGGTG
TGCCTCGATCCCCGGATCGGCAGTTTCTACAACAATCCTTCCTTCGGTTATGGCGGTTATTGCCTGCCCAAGGACACGAA
GCAGATGCTCGCCAATTACAAGGATGTGCCACAGAACCTCATCCAGGCGATCGTCTCCTCGAACACCACGCGCAAGGATT
TCGTCGCGTCGGAGGTCATCAAACGGAACCCGCGCGTCGTCGGCATCCATCGCCTCGCGATGAAGGCGGGGTCGGACAAT
TTCCGCGCCAGCAGCATCCTCGGCGTGATGAAGCGCGTGAAGGCCAAGGGGATCGAGGTGATCGTCTATGAACCGCTTGT
CGCGGAGGACCGGCTGTTCAACTCGCGCGTGATCCGCGATCTCGATGCGTTCAAGGCCGAAGCCGACGTGATTATCGCGA
ACCGTATCACCGACGACCTCGCCGATGTCGTCGACAAGGTTTACAGCCGCGACCTGTTCGGCGCCGACAGCTGA

Protein sequence :
MTSAKDSPVKIAVVGTGYVGISNAVLLAQHNAVVALDIDTRKVELVNARQSPIVDPEIEDYLANKQLNLVATTDKQAAYA
DANFVIVATPTDYDPDTNYFNTNSVESVIADALKLAPGALVVVKSTVPVGFTERMRAEHGSNDIVFSPEFLREGRALHDN
LHPSRIIVGNTHPRAADFARLLLEGSLKPDTAVLQTGNTEAEAIKLFANTYLAMRVAFFNELDTYAALHGVDSRQVIEGV
CLDPRIGSFYNNPSFGYGGYCLPKDTKQMLANYKDVPQNLIQAIVSSNTTRKDFVASEVIKRNPRVVGIHRLAMKAGSDN
FRASSILGVMKRVKAKGIEVIVYEPLVAEDRLFNSRVIRDLDAFKAEADVIIANRITDDLADVVDKVYSRDLFGADS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-87 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1563 YP_616609.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 7e-92 52