Gene Information

Name : Sala_0154 (Sala_0154)
Accession : YP_615211.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 149067 - 150500 bp
Length : 1434 bp
Strand : +
Note : -

DNA sequence :
ATGAGCACCGAAACGCATCTCAAGCAACATTATATCGGCGGCGGCTGGGTCGACTCCAAGGGTGGCAAGCTGCACGAGGT
CATCAATCCCGCGACCGAGGAGGCGGCCTCGACCGTCGTGCTCGGCACCGCGGCCGACGTCGACGCCGCCGTGGCCGCGG
CGCGCGAGGCGTTCAAAAGCTTCTCGCAGACGACGCGCGAGGAACGGCTGGAGCTTCTGAACCGGATCGTCGAGGAATAT
AAGAAGCGCGCGGGCGACCTCGCCAAGTCGATGGCGGCCGAAATGGGCGCGCCGGTAAGCTTCGCGGGCACGGCGCAGGT
CGGTGCCGGCATCGGGGGTTTCCTGGGCACGATCGCCGCGCTCAAGGATTTCAGCTTCACCGAACAACATGGTGCCAACA
AGGTCGTGTACGAACCGATCGGCGTCGTCGGCATGATCACCCCGTGGAACTGGCCGCTCAACCAGATCGCGCTGAAAGTC
GCTCCGGCGCTCGCCGGCGGCAACACGATGGTCCTGAAGCCGTCGGAGGAATGCCCCGGCAATGCGGTAATCTTTGCCGA
GATTCTTGACGCCGCGGGCGTCCCGCCGGGCGTGTTCAACCTGGTGCAGGGCGACGGCCCGACCGTCGGCCACGCGATCA
GCGCGCATCCGGGGATCGAGATGGTGAGCTTCACCGGCTCGACCCGCGCCGGCATCCTCGTCGCCAAGGCGGCGGCCGAC
ACGGTGAAGCGCGTCCATCAGGAGCTCGGCGGCAAATCGCCCAACATCGTCCTGCCCGACGCCGATTTCGAGGCGGTCCT
GCCGCCGACGGTACAGGGGGTGCTGGTCAACACCGGGCAAAGCTGTATCGCGCCGACGCGCATCCTGGTCCAGAAAGAGC
GCGAGGCCGAAGCGGTCGGCGTCATCAAGGCCATGTTCGACGGGACGCAGGTCGGCGACCCGATGAGCGAGGGCGCCCAT
ATCGGCCCCGTCGTCAACAAGGCGCAGTTCGACAAGATCCAGGGGCTGATCCAGTCGGCGATCGACGAAGGCGCGAAGCT
GGAAACCGGCGGCACCGGCCTGCCGAGCAACGTCAACCGCGGCTATTATGTCAAGCCGACGGTCTTTTCGGGCGTGACGC
CCGAGATGCGGATCGCCCGGGAAGAGATTTTCGGACCCGTCGCGACGGTCATGGCCTATGACACGCTTGACCAGGCGGTC
GAGATCGCCAACGACACCGAATATGGCCTGTCCGCCGTCGTGTCGGGCGATCCCGCCAAGGCCGCCGAGATCGCGCCGAA
GCTGCGCGCCGGCATGGTCGCGGTGAACAGCTGGGGTCCGGGGCCGGGTGCGCCTTTCGGCGGCTACAAGGCGTCGGGCA
ACGGCCGCGAAGGCGGGCTGTTCGGGCTGAAGGACTTCATGGAAGTCAAGGCGATCAGCGGCATTCCGGCGTAA

Protein sequence :
MSTETHLKQHYIGGGWVDSKGGKLHEVINPATEEAASTVVLGTAADVDAAVAAAREAFKSFSQTTREERLELLNRIVEEY
KKRAGDLAKSMAAEMGAPVSFAGTAQVGAGIGGFLGTIAALKDFSFTEQHGANKVVYEPIGVVGMITPWNWPLNQIALKV
APALAGGNTMVLKPSEECPGNAVIFAEILDAAGVPPGVFNLVQGDGPTVGHAISAHPGIEMVSFTGSTRAGILVAKAAAD
TVKRVHQELGGKSPNIVLPDADFEAVLPPTVQGVLVNTGQSCIAPTRILVQKEREAEAVGVIKAMFDGTQVGDPMSEGAH
IGPVVNKAQFDKIQGLIQSAIDEGAKLETGGTGLPSNVNRGYYVKPTVFSGVTPEMRIAREEIFGPVATVMAYDTLDQAV
EIANDTEYGLSAVVSGDPAKAAEIAPKLRAGMVAVNSWGPGPGAPFGGYKASGNGREGGLFGLKDFMEVKAISGIPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_0154 YP_615211.1 aldehyde dehydrogenase VFG0082 Protein 2e-47 42