Gene Information

Name : Sala_0149 (Sala_0149)
Accession : YP_615206.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 144103 - 145515 bp
Length : 1413 bp
Strand : +
Note : -

DNA sequence :
ATGGCTACGAAGCCCAAGGATATCATCGCCCGGATCAAGGACAACGACATCGAGTGGGTCGACCTGCGCTTCACCGACCC
CAAGGGCAAGTGGCAGCACCTGACCATGTGCGCCGGGGTGATCGACGAGGATGCGCTCGAAGACGGGCTGATGTTCGACG
GTTCGTCGATCGAGGGCTGGAAGGCGATCAACGAAAGCGACATGATCCTGAAGCCCGATCTCGACGCCGTCTATGACGAT
CCCTTTTCGGCGACGCCGATGCTGGTGATCTTCTGCGACATCGTCGAGCCGTCGACCGGCGAGGGCTATGCCCGCGATCC
GCGCACGACGGCGAAGCGCGCCGAGGCCTATCTCGGATCGACCGGCATCGGCGACACCGTCTATGTCGGCCCCGAAGCCG
AATTCTTCATGTTCGACGATGTCCGCTTCGAAACCGGCTATAACAAGTCGGGCTTCGAGATCGACGACATCGAGCTGCCG
ACCAACACCGGCCGCAGCTATGAGGGCGGCAACCTCGCCCACCGCCCGCGCGCCAAGGGCGGCTATTTCCCCGTCGCGCC
GGTCGACAGCGCGGTCGACATCCGCGCCGAAATGGTCTCGACGATGCTCGAAATGGGCCTGCCGTGCGACAAGCACCACC
ATGAGGTCGCCGCGGCGCAGCACGAGCTGGGCCTGACCTTCGGCACGCTGACGCAGACCGCCGACCGTATGCAGATCTAT
AAATATGTCGTCCACCAGGTCGCGCACGCCTATGGCAAGACCGCAACCTTCATGCCCAAACCGATCAAGGACGATAACGG
TTCGGGGATGCACACGCACATCTCGATCTGGGAAAAGGGCAAGCCGCTCTTTGCGGGCAATGGCTATGCCGGTCTCAGCG
ACATGTGCCTCTATTTCATCGGCGGCGTCATCAAGCACGCCAAGGCGCTCAACGCCTTCACCAACCCGACGACGAACAGC
TACAAGCGCCTTGTTCCGGGCTTCGAAGCGCCGGTGCTGCTCGCTTATTCGAGCCGCAACCGCTCGGCCTCGTGCCGCAT
TCCCTATGGCGCGGGCGCCAAGGCGAAGCGCGTCGAGTTCCGCTTCCCCGACGCGATGGCGAACCCCTATCTCTGCTATT
CGGCGCTGCTGATGGCGGGGCTCGACGGCATTCAGAACAAGATCCATCCCGGCGACGCGATGGACAAGAATCTCTATGAC
CTGCCGCCCGAAGAGCTTTCCGAAGTGCCGACCGTGTGCGGCAGCTTGCGTGAAGCGCTCGACAGCCTGATGGCCGATCA
CGACTTCCTTTTGAAGGGCGACGTGTTTTCGAAGGACCAGATCGAGGCCTATGTCGAGCTCAAATGGAACGAAGTCTATC
GGTTCGAACAGACGCCGAGCCCGGTCGAGTTCGACATGTATTACAGCGCCTGA

Protein sequence :
MATKPKDIIARIKDNDIEWVDLRFTDPKGKWQHLTMCAGVIDEDALEDGLMFDGSSIEGWKAINESDMILKPDLDAVYDD
PFSATPMLVIFCDIVEPSTGEGYARDPRTTAKRAEAYLGSTGIGDTVYVGPEAEFFMFDDVRFETGYNKSGFEIDDIELP
TNTGRSYEGGNLAHRPRAKGGYFPVAPVDSAVDIRAEMVSTMLEMGLPCDKHHHEVAAAQHELGLTFGTLTQTADRMQIY
KYVVHQVAHAYGKTATFMPKPIKDDNGSGMHTHISIWEKGKPLFAGNGYAGLSDMCLYFIGGVIKHAKALNAFTNPTTNS
YKRLVPGFEAPVLLAYSSRNRSASCRIPYGAGAKAKRVEFRFPDAMANPYLCYSALLMAGLDGIQNKIHPGDAMDKNLYD
LPPEELSEVPTVCGSLREALDSLMADHDFLLKGDVFSKDQIEAYVELKWNEVYRFEQTPSPVEFDMYYSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-108 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_0149 YP_615206.1 glutamine synthetase, type I VFG1399 Protein 5e-99 50