Gene Information

Name : Sala_1001 (Sala_1001)
Accession : YP_616051.1
Strain : Sphingopyxis alaskensis RB2256
Genome accession: NC_008048
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1024300 - 1025082 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
GTGGTGACGCTGGCGCTCGATCGGGTCAGCGTCACGCTCGGCCGCCGCGCCGTGCTGCATGACGTCAGCACCGCCTTTGC
GCCCGGCACACTGACCGCCATCGTCGGACCGAATGGCGCGGGCAAGTCGACGCTCGTGCGCGCCTTGCTGGGCCTCGTCC
CGGCAAGCGGTTCGGTGCAGGTCGATGGCGTCGAAGCCGCCGCCATGTCGCGCGCCGAACGCGCGCGGCGCATCGCCTAT
GTCCCGCAGGGGCAACTCCTCCACTGGCCGCTCACCGTCGAGCGGCTCGTCGGGCTCGGCCGCCTGCCGCACCTCGCCCC
CATGTCGCGGATTGGAGCGGCCGACCTTGCGGCGATCGAGCGCGCGATGGCGCGCGCCGACGTGCTGCATCTGCGCGACC
GGGTCGCTACCGAATTGTCGGGCGGCGAGCGCGCACGGGCCATGTTCGCGCGCGCGCTGGCGGTCGAGGCGGCGGCGCTG
ATCGCCGACGAGCCGCTCGCCAGCCTCGACCCCGGACATCAGATCGACGTGATGGACCTGCTGCGCGCCGAAGCCGCGGC
GGGCGGGACGGTGATCGCGGTGCTGCACGACCTCGCTATGGCGGCGCGCTATTGCGACCGGCTCCTGTTGATCGACACGG
GACGGATCCTGGCCGACGGGCCAGCCGGCCATGTGTTGACAGCGGAGCGGCTGCGCGCGGTCTATGGCATCGACGCGCGC
ATTGAAAACGGCGGTCCGTGGCCCACCATCACCGCGCTCGGTCGTGTGCGGCCCCTGGCCTGA

Protein sequence : 
MVTLALDRVSVTLGRRAVLHDVSTAFAPGTLTAIVGPNGAGKSTLVRALLGLVPASGSVQVDGVEAAAMSRAERARRIAY
VPQGQLLHWPLTVERLVGLGRLPHLAPMSRIGAADLAAIERAMARADVLHLRDRVATELSGGERARAMFARALAVEAAAL
IADEPLASLDPGHQIDVMDLLRAEAAAGGTVIAVLHDLAMAARYCDRLLLIDTGRILADGPAGHVLTAERLRAVYGIDAR
IENGGPWPTITALGRVRPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1001 YP_616051.1 ABC transporter BAC0164 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sala_1001 YP_616051.1 ABC transporter VFG1042 Protein 2e-26 41