|
Name : TM1040_0099 (TM1040_0099) Accession : YP_612094.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1121 EC number : - Position : 104599 - 105405 bp Length : 807 bp Strand : + Note : PFAM: ABC transporter related: (2.6e-51); SMART: ATPase: (2.9e-16); KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein, ev=1e-116, 80% identity DNA sequence : ATGATGCAGCTCTCATTGGCCAGCCATAATGGCCAGACCGCACCGGATACGCAGTGGGATCAAAGTCCGCTCGCCATTCG TGGTCTGACTGTCAGCTACGGTGAAAAGCCTGCGGTGTTTTCGGTCGACATGACAGTTGAGCCGGGCCAGATGACTGCGA TTATCGGGCCAAATGGAGCAGGGAAATCTACCCTTCTGAAGGCCGCGCTGGGCATTGTGCCGCCCGTGTCCGGCCGCGTG CAGGTGTTTGGTCGCCCGCTCGATCATCAACGCGCGCGGATCGCCTATGTGCCACAACGCGCATCAGTTGATTGGGATTT CCCAACCCGGGTGATCGACGTGGTGATGATGGGGCTCTATCGCGAGTTGGGGCTTTTGGGGCGCATCCGGGGGACCCACC ACAAGATCGCGAGAGACTGTCTGGAGCGCGTCGGGATGAGCGAATTTGCCACCCGTCAGATCGGGCAGCTTTCGGGCGGC CAGCAGCAGCGCGTGTTCCTCGCGCGCGCCCTGGCACAGGGCGCAGACCTCTATTTGCTGGACGAGCCCTTTGCAGGCGT GGATGCGGCCACGGAAAAAGCCATCATTGGCGTCCTCAAGGCTCTGCGGGCCGAGGGCAAGACCGTGGTGGTGGTGCATC ATGATCTGGCGACGGTAGGGGACTATTTCGACAATGTGTTCCTGATCAACACCCGCAAGGTGGCAGAAGGACCGGTTGCC GAGGCCTTCACCGCGGAGAATTTGCAGACGGCTTATGGTGGGCGGTTGGCCACGGCGCAGATCGAACAGATCGCGCGGCC TCTGTGA Protein sequence : MMQLSLASHNGQTAPDTQWDQSPLAIRGLTVSYGEKPAVFSVDMTVEPGQMTAIIGPNGAGKSTLLKAALGIVPPVSGRV QVFGRPLDHQRARIAYVPQRASVDWDFPTRVIDVVMMGLYRELGLLGRIRGTHHKIARDCLERVGMSEFATRQIGQLSGG QQQRVFLARALAQGADLYLLDEPFAGVDAATEKAIIGVLKALRAEGKTVVVVHHDLATVGDYFDNVFLINTRKVAEGPVA EAFTAENLQTAYGGRLATAQIEQIARPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0575 | NP_814340.1 | cationic ABC transporter ATP-binding protein | Not tested | Not named | Protein | 4e-50 | 45 |
| ef0093 | AAM75296.1 | EF0093 | Not tested | Not named | Protein | 3e-50 | 45 |
| phuC | YP_005682167.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 2e-25 | 44 |
| phuC | YP_005684259.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 2e-25 | 44 |
| cpfrc_01918 | YP_003784318.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 2e-25 | 44 |
| phuC | YP_005686351.1 | Iron(III) dicitrate transport permease-like protein yusV | Virulence | PiCp 7 | Protein | 4e-25 | 43 |
| sitB | AAD41066.1 | SitB | Virulence | centisome 63 pathogenicity island | Protein | 1e-43 | 43 |
| sitB | NP_461783.1 | ATP-binding protein | Virulence | SPI-1 | Protein | 1e-43 | 43 |
| sitB | YP_217782.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-43 | 43 |
| sitB | NP_457256.1 | Iron transport protein, ATP-binding component | Virulence | SPI-1 | Protein | 1e-43 | 43 |
| sitB | NP_806465.1 | iron ABC transporter ATP-binding protein | Virulence | SPI-1 | Protein | 1e-43 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_0099 | YP_612094.1 | ABC transporter | BAC0400 | Protein | 1e-65 | 59 |
| TM1040_0099 | YP_612094.1 | ABC transporter | BAC0440 | Protein | 5e-50 | 46 |
| TM1040_0099 | YP_612094.1 | ABC transporter | BAC0350 | Protein | 6e-44 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_0099 | YP_612094.1 | ABC transporter | VFG0526 | Protein | 6e-44 | 43 |
