Gene Information

Name : TM1040_0796 (TM1040_0796)
Accession : YP_612791.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 845629 - 846108 bp
Length : 480 bp
Strand : +
Note : TIGRFAM: single-strand binding protein: (4.7e-55); PFAM: single-strand binding protein/Primosomal replication protein n: (9.2e-33); KEGG: sil:SPO1637 single-strand binding protein, ev=7e-66, 72% identity

DNA sequence :
ATGATGGCTGGATCGCTGAACAAAGTTATGCTGATCGGTAACCTTGGCCGCGATCCGGAAGTTCGGACCTTCCAGAACGG
AGGCAAGGTCTGCAACCTCCGCATCGCGACCTCTGAGACCTGGAAAGACCGCAACACGGGCGAGCGCCGCGAAAAGACCG
AATGGCACTCCGTTGCGATCTTTAATGAAGGTCTGGTGCGCGTGGCCGAGCAATACCTGCGCAAAGGGTCGAAGGTCTAT
GTCGAAGGCCAGCTGCAGACCCGCAAGTGGCAGGACCAGAGCGGTCAGGACCGCTATTCAACCGAGATCGTGCTGCATGG
CTTTGGCTCCACGCTGACCATGCTGGACGGTCGCAATGGCGATGGTCAGTCCCGCGATGACGGTGGATATGGCGGCGGTC
AGGACAGCTGCGGCGGCAACCGGGGCGGTGGATACGGCTCTGGCAGTCAAAGCATCGATGACGATGAGATTCCGTTCTGA

Protein sequence :
MMAGSLNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSKVY
VEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGRNGDGQSRDDGGYGGGQDSCGGNRGGGYGSGSQSIDDDEIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 5e-27 57