Gene Information

Name : TM1040_0080 (TM1040_0080)
Accession : YP_612075.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein, P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 83627 - 84841 bp
Length : 1215 bp
Strand : -
Note : PFAM: cobalamin synthesis protein, P47K: (3e-91) cobalamin synthesis CobW-like: (3.1e-34); KEGG: jan:Jann_2254 cobalamin synthesis protein, P47K, ev=0.0, 78% identity

DNA sequence :
ATGTCCGATCCCCGCCTTCCCGTCACCGTCCTCTCCGGCTTTCTCGGCGCGGGGAAGACCACGCTTTTGAACCGCATCCT
GAACAACCGCGAAGGCCGGCGCGTTGCGGTGATTGTGAACGATATGAGCGAGGTCAACATCGACGCGGATCTGGTGCGCG
AGGGCGGCGCTGACCTCAGCCAGACCGAAGAAACGCTGGTGGAAATGTCCAACGGCTGCATCTGCTGCACCCTGCGCGAT
GACCTTCTGGCCGAGGTGCGCCGTCTCGCCGCTGAGAACCGCTTTGACTACTTGCTGATTGAGTCCACCGGGATCTCGGA
GCCGCTGCCGGTCGCCGCAACCTTTGATTTTCGCGATGCGGAGGGCGAGAGCCTCTCGGATGTGGCGCGTCTGGACACGA
TGGTCACGGTGGTCGACGCCGTGAACCTGCTGAACGATTTTGCCAGTCACGACCTGCTGGCGGACCGGGGCGAGACGCTG
GGCGAAGAAGACGAGCGCACCCTGGTGCATCTGCTGACCGACCAAATCGAATTTGCCGATGTGGTTGTGCTTAACAAGGT
GAGCCTCGCCAGCGCCGAGCAAGTGGACGCGGCACGCAAGATCATTCGCAGCCTCAACGCAGATGCCGAGATCATCGAGA
CCGATTTCAGCGAGGTGTCTGCCGACAAGATCCTCGACACCAAGCTCTTTGATTTTGAAAAGGCGCATGAACACCCGATG
TGGGCGAAGGAGCTTTATGGCTTTGCCGATCATGTGCCGGAGACCGAAGAATACGGCATCGCGTCCTTTGTCTATCGCGC
ACGGGCGCCGTTTGATCCCAGCAAATTGCACGTGGTGCTGAACGGCAATCTGCCCGGGGTAATCCGCGCCAAGGGGCATT
TCTGGGTTGCGACCCGCCCCGAGTGGGTGGCGGAATTCTCGCTTGCGGGGGCGCTATCAAGCGTGGCGCCCTTGGGGACA
TGGTGGGCATCCGTTCCTGCCGAACGCTGGCCCACCCACCAGCAGGCGCGCGACTATATACAGACGCATTGGCAGGAGCC
CTTTGGCGATCGCCGTCAGGAATTGGTTTTCATCGGCGCGGGCATCGACTGGCCCGCCCTGAAGGCCACGCTGGATGCCT
GCCTGATCCCCGAAGCAACGGCCGAGACTCTGCAGGACTATGCGGATCTGGACGATCCCTTCCCGCTGTGGCGGCGGGCC
GATCAGGCAGCATGA

Protein sequence :
MSDPRLPVTVLSGFLGAGKTTLLNRILNNREGRRVAVIVNDMSEVNIDADLVREGGADLSQTEETLVEMSNGCICCTLRD
DLLAEVRRLAAENRFDYLLIESTGISEPLPVAATFDFRDAEGESLSDVARLDTMVTVVDAVNLLNDFASHDLLADRGETL
GEEDERTLVHLLTDQIEFADVVVLNKVSLASAEQVDAARKIIRSLNADAEIIETDFSEVSADKILDTKLFDFEKAHEHPM
WAKELYGFADHVPETEEYGIASFVYRARAPFDPSKLHVVLNGNLPGVIRAKGHFWVATRPEWVAEFSLAGALSSVAPLGT
WWASVPAERWPTHQQARDYIQTHWQEPFGDRRQELVFIGAGIDWPALKATLDACLIPEATAETLQDYADLDDPFPLWRRA
DQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-82 49
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 2e-82 49