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Name : TM1040_0716 (TM1040_0716) Accession : YP_612711.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 771989 - 773809 bp Length : 1821 bp Strand : + Note : PFAM: ABC transporter related: (3.6e-53) Oligopeptide/dipeptide ABC transporter-like: (1.4e-09); SMART: ATPase: (9.6e-17); KEGG: sil:SPO2813 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, , ev=0.0, 82% identity DNA sequence : ATGCTGGACCAGCCCATTGCACAGATCAAAGGCCTTCGGGTCGAATTCGAAACCAAGGACGGCCCTGTGGTCGGGGTTGA GAATGTTTCGTTTGACGTGACTGCTGGTGAAACTTTGTGCATCGTTGGGGAGTCCGGATCGGGCAAATCTGTCTCGTCCC TGTCTTTGATGCGCCTCGTGGAATACGGTGGCGGCACCATCGCGGGCGGAGAATTGATGTTCAATCCCGGCGATGGCGAG GCGATCGACCTTGCTCAGGCCGAGACCGATTTGATGAAGCAGATTCGCGGAAATCAGATCGGAATGATTTTCCAGGAACC GATGACCGCGCTCAATCCGGTCTTCACAGTGGGCCGCCAGCTCACGGAAGGCCTGCGAATCCACAAGGGGATGGACAAAA AACAGGCAGAGGCCCGGGCCATCGAGATTCTGCGCGAGGTCCGCATTCCCGAGGCCGAGCGCCGCATGAAGCAATATCCG CACGAACTGTCTGGCGGGATGCGCCAGCGGGTAGTGATCGCGATGGCGATGGCGTGCGAGCCGCGTCTGCTCATCGCGGA TGAACCCACAACCGCGCTCGATGTGACCATTCAGGCCGAGATCCTCGCCCTGATGGACCGCTTGAAGCGTGAAACCGGCA CTGCGGTCATGTTTATCACGCACGACATGGCTGTCGTGGCGCAGATGGCCGACCGGGTGGTTGTCATGTTCCGCGGCAAC AAGGTCGAAGAGGGCACCGTCCACGAGATTTTCGAGAACCCGCAGCATGACTATACCAAGGCATTGCTGGCGGCGGTTCC CAAGCTTGGCGAGATGCGTGGCAAGGATTACCCCGAACCCATGAAGCTCATGGGCGTCGAGCAGGCCGAGATCAAGCCGA TCACCGGCACCGATGAGGTGCTGCTGAACGTCGAAAACCTCGTCACCCGTTTCCCTGTCAAAGGTGGGCTTCTGCGCCGC ACCGTGGCGCAGGTCCACGCGGTTGAGGATGTGTCCTTCAAGGTCTTCAAGGGTCAGACCCTGAGCCTCGTGGGCGAATC GGGCTGCGGGAAATCAACCTGTGGCCGGTCGATCCTGAGACTGGTGGAACCGACTTCGGGCAAGGTAGAGTTTGAGGGGC GCGATGTGATCGGCCTCAACCAGAAAGAACTGCACAAGGCGCGCCTTGATATGCAGATGATTTTCCAGGACCCCTTTGCC TCACTCAATCCGCAGATGCAGCTGATGGATCAGGTCGCGGAGCCGATGAAGAACTACAATATCGCCTCCGGGTCCGAAAT TCAGGACCGGGTCGCATCGCTCTTTGATCGGGTCCACCTGCCGCGCAGCTTCATGCGCCGCTTCCCGCACGAGATGTCCG GTGGTCAGCGCCAGCGGATCGCGATTGCCCGTGCGCTCGCGCTCAACCCGAAACTGATCGTTGCGGATGAGGCCGTCTCC GCGCTCGATGTGTCAGTGCAGGCGCAGGTCTTGAACCTGATGATGGAACTGCAGGCCGATCTGGGCCTCTCCTTCCTGTT CATCAGTCACGATATGGCCGTGGTCGAACGGGTGAGCCATCAGGTCGGCGTGATGTATCTGGGGCGTCTGGTCGAAATTG GCCCGCGTGCGCGTGTGTTTGAGAACCCGGCGCACCCCTATACGCAGGCGCTGATGAAGGCGGTTCCGATTGCCGACCCC AACCAGCGCAAGAGCGAAAAGGATCTGAACTTCAAACCGATCCCATCGCCGATCCACGACATGAACTATCAGGCAGAGCC CTCGCAATACATGGAAGTGGAGCCGGGGCACTTTGTGCTGACCACCGATTCTGGCTATTGA Protein sequence : MLDQPIAQIKGLRVEFETKDGPVVGVENVSFDVTAGETLCIVGESGSGKSVSSLSLMRLVEYGGGTIAGGELMFNPGDGE AIDLAQAETDLMKQIRGNQIGMIFQEPMTALNPVFTVGRQLTEGLRIHKGMDKKQAEARAIEILREVRIPEAERRMKQYP HELSGGMRQRVVIAMAMACEPRLLIADEPTTALDVTIQAEILALMDRLKRETGTAVMFITHDMAVVAQMADRVVVMFRGN KVEEGTVHEIFENPQHDYTKALLAAVPKLGEMRGKDYPEPMKLMGVEQAEIKPITGTDEVLLNVENLVTRFPVKGGLLRR TVAQVHAVEDVSFKVFKGQTLSLVGESGCGKSTCGRSILRLVEPTSGKVEFEGRDVIGLNQKELHKARLDMQMIFQDPFA SLNPQMQLMDQVAEPMKNYNIASGSEIQDRVASLFDRVHLPRSFMRRFPHEMSGGQRQRIAIARALALNPKLIVADEAVS ALDVSVQAQVLNLMMELQADLGLSFLFISHDMAVVERVSHQVGVMYLGRLVEIGPRARVFENPAHPYTQALMKAVPIADP NQRKSEKDLNFKPIPSPIHDMNYQAEPSQYMEVEPGHFVLTTDSGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-101 | 46 |
