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Name : TM1040_0631 (TM1040_0631) Accession : YP_612626.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Resistance Product : acriflavin resistance protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 668659 - 671709 bp Length : 3051 bp Strand : + Note : PFAM: acriflavin resistance protein: (9.5e-69); KEGG: sil:SPO0921 transporter, AcrB/AcrD/AcrF family, ev=0.0, 72% identity DNA sequence : ATGGACATTGCACGCGGATCAATTCAACGGCCGCTTTATACGTGGCTGATCATGCTGTTTGCCCTCTTTGGGGGCATCTG GGGCTTTCTCTCGCTGGGTCGATTGGAAGACCCTGCCTTCACCATCAAACAGGCGGTGATCCAGACGACTTATGCCGGCG CCAGCGCCGAGCAGGTGGCCCTGGAGGTGTCCGAACCTCTGGAATCCGCCATCCAGAAGATGGAGGAAGTCAAGGAAATC ACCTCCATGAACCGCCCCGGCGTATCGATCATCGAAGTGGAGATGCGCGACACCTATGACGGCTCGGAGTTGCCACAGAT CTGGACCAAACTGCGCGCAAAGGTGCGTGATGCGGCCCGTGGCCTGCCGGATGGCGTCAGCGAGCCGCTGGTGAACGACA GCTTTGGGGACGTGTTCGGTATCTTCTATGCGGTAACGGCTGAAGGGTTTTCCGACCGCGAGAAATACGAGCTATCGACC TTCCTGCGCCGCGAGTTGTTGACCGTGGACGGTGTGGCGGATGTCGATATCTCGGGGCTGCGCAAAGAGACAATCTATGT CGAACCCGACATGCCGATTGCCACCAACCTTGGGGTTTCGGTCAATGCGATCGCCAACGCCGTTGCCACTTCGAACTCGG TGACACCGGCGGGAGAGATCAAGGCCGGACCGATGAACACCATTCTGCAAACTCCCGAAGGCTCGGATTCCGTTTCGGAG ATTGCGGGTCTGACGGTGGGCGTCGGGGGTGAGACCATCAACATCATCGACATCGCAAATGTTTGGCGCGGACGAGAGAT CGACCCGTCGCTGATGATCCGCTTTGACGGGGTTGAGGCCTTTACCCTTGGGGTGTCCGGGATCGCCAATGAAAACATTG TGGATGTTGGTCATCGCGTGGACGCCAAGCTGGCGGAGCTGGACAGCGACATTCCCTTTGGCGTGGAACTGCATCCGATC TATCAGCAGCATATCGTTGTGGAGCAGGCGTCCAATGATTTCCTCGTGAACCTTGCCATGTCGGTGGCCATTGTGATCGT GGTGCTGGCGCTCTTCATGGGGTGGCGCGCGGCCATTGTGGTCGGGACAACCCTGCTGCTGACGGTGGTGGGGACGCTCT TCTTCATGGCGCTGTTTTCAATCGAGATGGAACGCATCTCGCTTGGGGCGTTGATCATCGCCATGGGCATGCTCGTCGAT AACGCCATCGTGGTGGCGGAGGGGATGCAAATCTCCATGCAAAAAGGCAGATCCTCGCGTGAAGCCGCGCAGGAGGCGGC CTCGAAGACCCAGATCCCTCTGTTGGGCGCGACGGTGATTGGCATCATGGCCTTTGCCGGGATCGGGCTCAGCCCGGACG CCACGGGCGAGTTCATGTTCTCGCTCTTTGCCGTGATCGGAATTTCGCTTCTGCTGAGCTGGATTCTTGCGCTGACGGTC ACGCCGCTCTTGGGGCATTACTTCTTTAAACGCGGTTCGGGAGACGATCAGGACAGCTACAACGGGCTGTTGTTTCGCAG CTACGGCGCTCTGCTGCGCGGCGCACTCAAGGCGCGCTGGCTTGTGGTGGTCGGCCTGATTGGCGTGACTGTGATGTGTT TCATGGGGTTTGGCCTCATCAAGCAGCAGTTCTTTCCGAACTCCAACACGCCGTTGTTCTATGTGCACTACAAGTTGCCA CAGGGCACCGCGATCGAAGCAACCTCTGCGCATATGGCTGAAATGGAATCCTGGCTGGCTGCGCGCGATGAGGTGGTATC GACCGCAACCTTCGTGGGGCAGGGGGCGACCCGCTTCTTGTTGACCTATGCCGGTCAGAAGGCCAATCCAAGCTACGGGC ATCTGATCATCCGCACGGAAAATCTCGAACAGATCCCGGGCTTGCAGGCGGATCTCGAGGCCTGGGGCAAGGCGCATTTT CCCGAAGGTGAGTTCCGCACAGAGCGGCTGGTCTTTGGCCCCGGCGGCGGCGCCCCAGTTGAGGTGCGTTTCTCTGGTCC GGATCCGGCTGTGCTGCGCCGCCTTGCCAATGAAGCCAAGGAACTGCTGGAGACAGAGAGCGATCTGACGCGCGATGTAC GTCACAATTGGCGCGAGCAGGAGTTGGTGCTCAAACCCGTCTACGCCACGGACCGGGCGCAAACGGCTGGGGTGACGCGA GAGGCGATCTCGAGCGCGCTGCAGTTCTCGACCAACGGGGTGACAACGGGGGTGTTCCGCGAACGCGAACGCCTGATCCC GATTGTCATGCGCCAGCCGCAGGAAGACCCTTATAACGTGATGAACCAGGTGGTGTTTTCGGAGACCTCTGGCAGCTGGA TCCCGCTGGAACAGATGATCGATGGCATCTCCTACGAGGTTCAGAACACGCTCGTGCATCGGCGCGACCGCGTCTACACT ATCACCGTGGGGGCGGATGTATTGCCGGATGTGACGGCTGCCACCGCCTTTGGCGAGGTGCAGGCCGCGATCGAGGCCAT CGAGGTGCCGGTCGGCTACAAGATGGAATGGGGCGGGGAGCATGAGAACTCCTCGGAGGCCAATGCAAGTCTCGGCAAGC AATTGCCGCTCTCGCTGCTGATCATGGTGCTGATCTCCGTTCTGCTCTTCAATGCGATCCGTCAGCCGATCATTATCTGG CTGCTGGTCCCGATGAGCGTGAACGGGGTTGTGATCGGTCTCTTGGGCACGGGGCTTCCCTTTACGTTCACAGCACTTCT TGGTCTGCTGAGCCTGTCCGGCATGCTGATCAAGAACGGGATCGTTCTGGTGGAAGAAATCGACATTGTCCGCCGCGAAG AGGGGCTGCCGCTGCGCGAGAGCATCGTGAAGGCCTCTGTGTCGCGTTTGCGTCCCGTGATGCTTGCGGCGATTACGACC ATCCTCGGTATGGCCCCGCTTATGAGCGATGCCTTCTTCGTGTCGATGGCGGTGACGATCATGGGCGGTCTGGCCTTTGC AACAGTGCTGACGCTTGTTGCGGCGCCGGTGTTCTACCTGATCTTTTTCAAAGGGGTGGAACGGCAGGAGCAGAAGGCAG CCGCCGCCTAG Protein sequence : MDIARGSIQRPLYTWLIMLFALFGGIWGFLSLGRLEDPAFTIKQAVIQTTYAGASAEQVALEVSEPLESAIQKMEEVKEI TSMNRPGVSIIEVEMRDTYDGSELPQIWTKLRAKVRDAARGLPDGVSEPLVNDSFGDVFGIFYAVTAEGFSDREKYELST FLRRELLTVDGVADVDISGLRKETIYVEPDMPIATNLGVSVNAIANAVATSNSVTPAGEIKAGPMNTILQTPEGSDSVSE IAGLTVGVGGETINIIDIANVWRGREIDPSLMIRFDGVEAFTLGVSGIANENIVDVGHRVDAKLAELDSDIPFGVELHPI YQQHIVVEQASNDFLVNLAMSVAIVIVVLALFMGWRAAIVVGTTLLLTVVGTLFFMALFSIEMERISLGALIIAMGMLVD NAIVVAEGMQISMQKGRSSREAAQEAASKTQIPLLGATVIGIMAFAGIGLSPDATGEFMFSLFAVIGISLLLSWILALTV TPLLGHYFFKRGSGDDQDSYNGLLFRSYGALLRGALKARWLVVVGLIGVTVMCFMGFGLIKQQFFPNSNTPLFYVHYKLP QGTAIEATSAHMAEMESWLAARDEVVSTATFVGQGATRFLLTYAGQKANPSYGHLIIRTENLEQIPGLQADLEAWGKAHF PEGEFRTERLVFGPGGGAPVEVRFSGPDPAVLRRLANEAKELLETESDLTRDVRHNWREQELVLKPVYATDRAQTAGVTR EAISSALQFSTNGVTTGVFRERERLIPIVMRQPQEDPYNVMNQVVFSETSGSWIPLEQMIDGISYEVQNTLVHRRDRVYT ITVGADVLPDVTAATAFGEVQAAIEAIEVPVGYKMEWGGEHENSSEANASLGKQLPLSLLIMVLISVLLFNAIRQPIIIW LLVPMSVNGVVIGLLGTGLPFTFTALLGLLSLSGMLIKNGIVLVEEIDIVRREEGLPLRESIVKASVSRLRPVMLAAITT ILGMAPLMSDAFFVSMAVTIMGGLAFATVLTLVAAPVFYLIFFKGVERQEQKAAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 2e-158 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_0631 | YP_612626.1 | acriflavin resistance protein | BAC0519 | Protein | 1e-174 | 44 |
| TM1040_0631 | YP_612626.1 | acriflavin resistance protein | BAC0428 | Protein | 1e-170 | 44 |
| TM1040_0631 | YP_612626.1 | acriflavin resistance protein | BAC0526 | Protein | 9e-167 | 42 |
| TM1040_0631 | YP_612626.1 | acriflavin resistance protein | BAC0425 | Protein | 8e-159 | 41 |
