Gene Information

Name : TM1040_0057 (TM1040_0057)
Accession : YP_612052.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0654
EC number : -
Position : 59044 - 60270 bp
Length : 1227 bp
Strand : -
Note : TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family: (2.4e-168); PFAM: monooxygenase, FAD-binding: (4.1e-10); KEGG: sil:SPO3419 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, ev=1e-167, 70% identity

DNA sequence :
ATGACTGATACGCGTGATATCCTGATTGTGGGCGGAGGCCTGAATGGTCCGTCGCTTGCTCTTGCGCTGGCACAGGCTGG
CCATTCTGTGACCCTGATCGACGCGCTTCCGGCGCCCCTGCGCGAGGACGCCGAATTTGACGGCCGTTCCTATGCTCTGG
CGCTTGCCTCGACGCGGCTCCTGCAACAGATCGGGATCTGGGCAGTTATCGAGGATCACGCTCAACCGATGAACGAGATC
AAGGTTAGCGACGGCGTTGCCGGTCGCGGCCCTTCGCCGCTTTTCCTGCATTTTGAGGAAAGCGACCTCGACGAGGGCCC
CATGGGCTACATGGTCGAAGATCGCTACCTGCGCCGCGCCCTTCTGAAAGCACTCGAGGCCGAGCCAAAAATCACCCAGA
TCTCGGGCCAGCCTGTGATCGCACAGACCGTGAGTGCGGATGCCATCACCGTCACTCTCGAAGATGGCACACAGCTCTCG
GGTGCGCTTTTGGTCGGCGCGGATGGACGTCAAAGCGGCACCGCCGCGCGCGCCGGCATCAAGCGCACCGGGTGGGATTA
CGGCCAGACCGCACTGGTCTGCGCTATCTCACATGCGCAACCTCACAACGGCATTGCCCATCAGTTCTTTATGCCGCCGG
GGCCGCTTGCAATTCTGCCGTTGCCGGGCAATCGCAGCTCTATTGTCTGGAGTGAGACTCATGCCGAGGCTGCGCGCATT
CAGGCACTTTCGGATCAGGACTACCTCTCGGTGCTGCGCCCCCGGTTTGGGTCTTTCCTCGGAGAGATCGATTTGGAAGG
CAAGCGCTTCAGCTATCCGCTGAAATTGAGCCTTGCCAATGCCTTTTATGGCGAGCGACTGGCCTTGGTGGGCGATGCGG
CGCATGGGCTGCACCCGATCGCGGGCCAGGGACTCAATGCGGGGCTGCGCGACATCGCCAGCCTTGCAGAAGTTCTGACC
GATGCAGCGCGGCGCGGTGAGGATCTCGCCAGCCCCTTGGTTCTGGCGCGCTATCAACAGTGGCGCCGGTTCGACACCAC
CTCTCTCGCGCTAGCGACAGATGTGTTCAACAAGCTGTTTTCAAACGACAATCCTATCCTGCGCGCCACCCGAGATCTGG
GGCTTGGCCTCACAAATGCACTGCCTGGCCTACGCCGAGGTTTTGTGCGCGAAGCGGCAGGACTTTCGGGAGATTTGCCG
CGCCTGTTGCGCGGGCGCCCGCTCTGA

Protein sequence :
MTDTRDILIVGGGLNGPSLALALAQAGHSVTLIDALPAPLREDAEFDGRSYALALASTRLLQQIGIWAVIEDHAQPMNEI
KVSDGVAGRGPSPLFLHFEESDLDEGPMGYMVEDRYLRRALLKALEAEPKITQISGQPVIAQTVSADAITVTLEDGTQLS
GALLVGADGRQSGTAARAGIKRTGWDYGQTALVCAISHAQPHNGIAHQFFMPPGPLAILPLPGNRSSIVWSETHAEAARI
QALSDQDYLSVLRPRFGSFLGEIDLEGKRFSYPLKLSLANAFYGERLALVGDAAHGLHPIAGQGLNAGLRDIASLAEVLT
DAARRGEDLASPLVLARYQQWRRFDTTSLALATDVFNKLFSNDNPILRATRDLGLGLTNALPGLRRGFVREAAGLSGDLP
RLLRGRPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ubiH CAD42832.1 putative 2-octaprenyl-6-methoxyphenol 4-monoxygenase Not tested trw-PAI Protein 9e-53 41