Gene Information

Name : TM1040_0519 (TM1040_0519)
Accession : YP_612514.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 545281 - 547413 bp
Length : 2133 bp
Strand : -
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
ATGCTTGACGCAAGCGTAACCGCCGATCTCGACTATCACGCGCTGAACGCGATGTTGAACCTCTATGACGACGAGGGCAA
CATCCAGTTCGACGCCGACCGTATGGCGGCCCGGCAGTATTTCCTGCAACACGTGAACCAGAACACCGTGTTCTTTCACT
CGCTGGATGAAAAGCTCGGCTACCTCGTCGAGAAAGGCTATTACGAGCCGGAGGTGCTGGATCAGTATTCCCGCAACTTC
CACCGCAAGATCTGGGATGCGGCCTACGCCAAGAAGTTCCGCTTCCCGTCCTTCCTCGGGGCGTTCAAATACTACACCTC
CTACACGCTCAAGACCCGTGACGGGCAGCGCTATCTCGAGCGCTATGAAGATCGTGTGGTGATGAACGCGCTGACGCTGG
CACGCGGCGATGAAAAGCTCGCGATGAAGCTGATGTCGGAGATCATCGACGGTCGTTTCCAGCCTGCTACGCCAACCTTC
CTCAATGCCGGCAAAAAAGCCCGTGGCGAGTTTGTGTCCTGCTTCCTCTTGCGTCTCGAAGACAACATGGAGTCGATCGG
ACGCGGCATCAACTCGGCGCTGCAGCTCTCCAAACGCGGCGGTGGCGTGGCCTTGATGCTGACCAACATTCGTGAACACG
GCGCCCCGATCAAGGGCATCGAGAACCAGTCTTCGGGCGTCATCCCGGTGATGAAGCTTCTTGAGGACAGCTTTTCCTAC
GCCAACCAGCTGGGCGCACGCCAGGGCGCGGGCGCGGTCTATCTGAACGCGCATCACCCGGATATTCTGCGTTTCTTGGA
TACCAAGCGCGAAAACGCAGATGAGAAAATCCGCATCAAGACGCTCTCGCTTGGCGTGGTGATCCCCGACATCACCTTCC
AGCTCGCCAAGAAAAACGAGGACATGTATCTGTTCTCGCCGCATGACGTGGAAAAGGTCTACGGTCAGGCCTTCTCGGAA
ATCTCGGTCACCGAGAAATATCACGAGATGGTGGACAACCCGCAGATCCGCAAAAAGAAGATCAACGCGCGCGCGTTCTT
CCAGACCATTGCCGAGATCCAGTTCGAGTCCGGCTACCCTTACATCATGTTCGAGGACACGGTGAATGCCGCAAACCCGA
TTGCGGGCCGCATCGCGATGTCGAACCTCTGCTCGGAGATCCTGCAGGTCAACGAGCCGTCCAAATTCAATGACGACCTG
TCCTATGAGCAGATGGGCACGGATATTTCCTGCAACCTTGGCTCGATGAACATCGCCCGTGCGATGGACGGTGGCGATCT
GGCAGGCACTGTGGGCACCGCGATCCGCGCGCTCAATGCAGTGTCGGAAATGTCGAGCATCGACTCCGTACCTTCCATCC
GCAAGGGCAACGAAGAAGGCCACGCAATTGGTCTTGGTCAGATGAACCTGCATGGATACCTCGCCCGCGAGCGCATCCAT
TACGGCAGCGCAGAAGGTGTGGATTTCACCAATATCTACTTCTGCACGGTTCTGTATCACGCGATCAGCGCCTCGAACGC
CTTGGCAAAGGAAAAGAAATCCAAGTTCAAAGGGTTTGAAGACTCGGCCTATGCCGATGGCAGCTTCTTTGAGAAATATG
TCGAGAAGGACTGGCTGCCGGAAACCGACCGGGTGAAAGAGCTGTTTGAGACCGCAGGTGTCGAGATCCCCACCCGCAAG
GACTGGGAAGCGCTGCGCGACAAGGTGATGAAGCACGGGCTTTATAACCGCAACCTTCAGGCGGTGCCGCCCACCGGCTC
GATCAGCTATATCAACTATGCCACCTCCTCGATCCATCCGATCACCGCAAAGATCGAGATCCGCAAGGAAGGCAAGATCG
GTCGCGTCTACTATCCCGCGCCCTATATGACCAATGACAACCTCGAATATTACCGCGATGCCTATGAAATCGGGCCTGAG
GCGATCATCGACACATATGCGGCTGCGACACAGCATGTGGATCAGGGGCTTTCACTGACCCTGTTCTTCCCGGCGGAAGC
ATCGACCCGCGACATCAACCGCGCGCAGATCTACGCGTGGAAGAAGGGGATCAAGACGATCTACTACATCCGCCTGCGCC
AGCAGGCCCTCGAAGGCACCGAAGTCGAAGGCTGCGTGTCCTGTTCGCTGTAA

Protein sequence :
MLDASVTADLDYHALNAMLNLYDDEGNIQFDADRMAARQYFLQHVNQNTVFFHSLDEKLGYLVEKGYYEPEVLDQYSRNF
HRKIWDAAYAKKFRFPSFLGAFKYYTSYTLKTRDGQRYLERYEDRVVMNALTLARGDEKLAMKLMSEIIDGRFQPATPTF
LNAGKKARGEFVSCFLLRLEDNMESIGRGINSALQLSKRGGGVALMLTNIREHGAPIKGIENQSSGVIPVMKLLEDSFSY
ANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKKNEDMYLFSPHDVEKVYGQAFSE
ISVTEKYHEMVDNPQIRKKKINARAFFQTIAEIQFESGYPYIMFEDTVNAANPIAGRIAMSNLCSEILQVNEPSKFNDDL
SYEQMGTDISCNLGSMNIARAMDGGDLAGTVGTAIRALNAVSEMSSIDSVPSIRKGNEEGHAIGLGQMNLHGYLARERIH
YGSAEGVDFTNIYFCTVLYHAISASNALAKEKKSKFKGFEDSAYADGSFFEKYVEKDWLPETDRVKELFETAGVEIPTRK
DWEALRDKVMKHGLYNRNLQAVPPTGSISYINYATSSIHPITAKIEIRKEGKIGRVYYPAPYMTNDNLEYYRDAYEIGPE
AIIDTYAAATQHVDQGLSLTLFFPAEASTRDINRAQIYAWKKGIKTIYYIRLRQQALEGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 75