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Name : TM1040_2970 (TM1040_2970) Accession : YP_614964.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3135228 - 3136025 bp Length : 798 bp Strand : + Note : PFAM: Integrase, catalytic region: (4.6e-37); KEGG: mlo:mll6088 transposase, ev=1e-117, 75% identity DNA sequence : ATGCGGGCGGATTGGCAGGTGTCGATCCGCCGGGCCTGCGAGGTGATCCGGTTCGATCCGAGAACCTATCGCTACAAATC CCGCCGGCCTGGGCAGGCCGCTTTGGAACAGCGGATACGAGAGATTTGCCAGACGCGCGTGCGCTTCGGCTACAGGCGCG TGCATGTGCTGCTGCGCCGGGAGGGCTGGGAGATCAACGCCAAGAAGACCTATCGCATTTACAAGGAGTTGGGTATGCAA CTTCGGAGCAAGACACCTAAGCGCCGGGTGAAGGCCAAGCTGCGGGATGACCGCAAGGAGGCTGTCAGCCCCAATGACGT CTGGGCTATGGACTTTGTTCATGATCAGCTGGCTACAGGCTGGAAACTTCGGGTTCTGACGGTCGTCGACACCTTCTCAC GCTATGTCCCGGTGCTTGATGCTCGGTTCACATATCGCGGGGAGGACGTGGTCGCGACGCTTGAGCAAGTATGCAAGCGC ACCGGCTACCCAGCCACCATCCGTGTTGACCAGGGCAGCGAGTTCATCTCCAAGGATATGGACCTTTGGGCCTATGCCAA CGACGTGACATTGGACTTCTCCCGTCCGGGCAAACCTACCGACAACGCCTTCATCGAGGCGTTCAATGGCCGGTTCCGGG CGGAGTGCCTGAACGCGCACTGGTTCATGAGCCTTGAAGATGCAGCCGAAAAGTTGGAGGCTTGGCGTAGAGACTACAAT GAAGAACGCCCGCACGGGGCTATCGGGAACAAGGTCCCGGCAGACCTGATGAAATCAGTTCACGACACCAGCCCGTGA Protein sequence : MRADWQVSIRRACEVIRFDPRTYRYKSRRPGQAALEQRIREICQTRVRFGYRRVHVLLRREGWEINAKKTYRIYKELGMQ LRSKTPKRRVKAKLRDDRKEAVSPNDVWAMDFVHDQLATGWKLRVLTVVDTFSRYVPVLDARFTYRGEDVVATLEQVCKR TGYPATIRVDQGSEFISKDMDLWAYANDVTLDFSRPGKPTDNAFIEAFNGRFRAECLNAHWFMSLEDAAEKLEAWRRDYN EERPHGAIGNKVPADLMKSVHDTSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 6e-47 | 48 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 3e-54 | 46 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 4e-41 | 46 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 1e-31 | 42 |
