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Name : TM1040_2968 (TM1040_2968) Accession : YP_614962.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3134061 - 3134855 bp Length : 795 bp Strand : + Note : PFAM: Integrase, catalytic region: (3.3e-31); KEGG: jan:Jann_3728 integrase protein, ev=1e-100, 76% identity DNA sequence : ATGCCAAAAAACTACAACCAGCGGCTGGCCTGTGCCTTGGCCGGGATTGATCCGCGTGTCTATAGGCGACGACCATCCAG ACCGGAGGAGACAGAACTCCGAGAGAGGCTGAAGGAACTGTCCGGGGAACGTCGGCGCTTGGGCTATCGGCGGCTGCACC GCCTGCTGGGGCGAGAGGGCTGGCAGGTGAATTGGAAGAAGATTTACCGGATTTACCGCGAAGAAGGCCTGACAGTGCGT AAGCGTGGTGGTCGCAAAGTAGCGATTGGAACGCGCGCGCCCATGTCGATCCCGCAGGGGCCGAACCACCGATGGTCCTT GGACTTTGTCTCAGACAGCCTTTCAGATGGGCGCCGGTTCCGTGTCCTGTGCGTCATCGATGACTTCAGCAGGGAATGCC TGGCCTGCGTGGTCGACACCTCGCTGTCAGGGCAGCGCGTGGGACGAGAACTTGATAGCACTGTCCGAACGCGTGGTTAT CCCTGCATCGTGATCAGCGACAACGGAACGGAACTGACTTCGAGCGCCATTCTGAGATGGCAGGAGGATCGAAAGGTCGA GTGGCACTACATTGCGCTTGGAAAGCATATGCAGAACGGCTTTGTGGAAAGCTTCAACGGCCGCCTACGGGACGAGTGTC TTAACGAGCACCTGTTTGCCAACCTGCGCCATGCCAGAGGACTGATCTCGGCTTGGCACACCGACTACAATCACCACCGC CCCTACATGAGCATCGACGGGCTCACCCCGCGGGAGTATCATCAACGGTCAGTAAAGGACCAAACCCTGATGTGA Protein sequence : MPKNYNQRLACALAGIDPRVYRRRPSRPEETELRERLKELSGERRRLGYRRLHRLLGREGWQVNWKKIYRIYREEGLTVR KRGGRKVAIGTRAPMSIPQGPNHRWSLDFVSDSLSDGRRFRVLCVIDDFSRECLACVVDTSLSGQRVGRELDSTVRTRGY PCIVISDNGTELTSSAILRWQEDRKVEWHYIALGKHMQNGFVESFNGRLRDECLNEHLFANLRHARGLISAWHTDYNHHR PYMSIDGLTPREYHQRSVKDQTLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 4e-41 | 46 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 3e-41 | 46 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 2e-28 | 44 |
