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Name : TM1040_2966 (TM1040_2966) Accession : YP_614960.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Virulence Product : ATP synthase FliI/YscN Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 3132230 - 3133558 bp Length : 1329 bp Strand : + Note : KEGG: sil:SPO0183 H+-transporting two-sector ATPase, flagellum-specific, ev=1e-169, 68% identity; TIGRFAM: ATP synthase FliI/YscN: (6.8e-133); PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region: (9.4e-97); SMART: ATPase: (2.1e-08) DNA sequence : ATGATGAAATCGATCCAGGCGCTCAGCCAAGAACTGGCCAATACTCGCCTTGCCGCGCCCATGGGCCGGGTGACAGGGAT TTCAGGTGGCGAGATCGAAGTCTCAGGTCTGGAAAGCCAGGCGCGGATCGGCGATCGGCTAACCCTGAGACGCGGTAAGA AAGACGATCTGCATGGCGAAGTGCTGGCAATTGGTTCAGACCACATTCGTATGTTGCCCGATACTGCCCCCGAGCGTGCC TCCATCGGGGATGCGGTCCTTTTGTTCCAGACGCCCGAGTTCGCCCCGGATGACAGCTGGGTTGGCCGCGTCATTGATCC CTTTGGGGAGCCTCTGGATGGCAAGCCCATGTTGCGCGGGGTCGAGAGCCGGGACCTGATGGAAAGCCCGCCCAAAGCCG CTGCGCGGCGCGGTCTTGGTAAACGGCTCTCGACGGGTCTTGCCATTCTCAACACCGTGCTTCCGATTGTAACGGGGCAG CGGATCGGTCTTTTTGCCGGGTCTGGCGTGGGTAAATCTACCCTGATGGCGCAGCTGGCGCAGAACATGGAAGCGGACGT CGTCGTGATGGCGCTGATCGGGGAACGCGGGCGCGAGGTCAATCACTTCGTGAAGGAAGTGCTGGGGCCTGAAGGTATGA AACGCGCAGTTGTTGTCGCTGCGACCTCAGACCAATCCGCGCTCGTGCGTAGACGCTGCGCATGGGCGGCGATGTCTGTT GCGGAGCACTTTCGGGATCAGGGGCTGAATGTGCTGTTCATGGCCGATTCGATCACGCGATTTGCAGAAGCGCATCGTGA AATTGCTGTCGCCTCGGGTGAAGCCCCGGCGCTTCGCGGGTTTCCGCCGTCGGTTACACCCCTGATTACGGGTCTTTGTG AACGCGCCGGACCGGGGCTTGAAGGTCAGGGAGACATTACTGCTGTCTTTAGCGTTCTGGTCGCCGGCTCTGACATGGAC GAACCGATTGCAGACATTCTACGCGGGGTTTTGGACGGGCATATTGTGCTCAATCGCGAAATTGCAGAACGAGGACGATT CCCGGCGATTGATGTCTCGCGATCAGTCTCGCGCAGTCTGCCCGCCGCAGCGACCAAGGAAGAAAACGAGATGATTCTGG CTGTACGGAAGTTCCTCGGGGCCTATGAACAGTCTGAGGTTATGATCCGTGCGGGTCTGTATTCTGAAGGCAATGATCTT GTACTCGACCAAGCTGTAAAAATCTGGCCAGAGCTAGATTCTTTCTTTGGTCGCAATGAGCTGGATGGAATCAAGGGCAG CTTCAATCGCTTGGCCCTGTTGCTCAGACGCGCAGGTGGCGGCCGGTAG Protein sequence : MMKSIQALSQELANTRLAAPMGRVTGISGGEIEVSGLESQARIGDRLTLRRGKKDDLHGEVLAIGSDHIRMLPDTAPERA SIGDAVLLFQTPEFAPDDSWVGRVIDPFGEPLDGKPMLRGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQ RIGLFAGSGVGKSTLMAQLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWAAMSV AEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAGPGLEGQGDITAVFSVLVAGSDMD EPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVSRSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDL VLDQAVKIWPELDSFFGRNELDGIKGSFNRLALLLRRAGGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-63 | 46 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 7e-57 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-57 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 7e-58 | 45 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-57 | 45 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-54 | 44 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 8e-61 | 44 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 8e-61 | 44 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 3e-52 | 44 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-52 | 44 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-57 | 42 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 1e-55 | 42 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 1e-55 | 42 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 1e-55 | 42 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 1e-55 | 42 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 5e-56 | 42 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-57 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-57 | 41 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-57 | 41 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-57 | 41 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-57 | 41 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-57 | 41 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG0515 | Protein | 4e-58 | 45 |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG1254 | Protein | 2e-58 | 42 |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG0192 | Protein | 2e-56 | 42 |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG0812 | Protein | 6e-56 | 42 |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG2331 | Protein | 6e-64 | 42 |
| TM1040_2966 | YP_614960.1 | ATP synthase FliI/YscN | VFG0730 | Protein | 3e-56 | 42 |
