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Name : fliP (TM1040_2944) Accession : YP_614938.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 3114200 - 3114946 bp Length : 747 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGACACGAAAATTTCTCGCTCTGGGCGTGTTGGCAGTCTTTGCGCTGCTGGCACAGCCCCAGGTAGCGCTGGCGCAAGA ATTGAGCCTTAATCTCGCCGATGGTCAATCGATCTCGGCCCGCACCATCCAGCTGATCCTGCTTATCACTGTTCTCAGTG TGGCGCCGGGCTTGCTGGTCATGCTTACCTGTTTTCCCTTCCTGATCACGGTTCTGTCGATCCTGCGTCAGGCGATCGGG TTGCAGCAAGCCCCGCCGAACATGCTCATGATCAGCCTTGCGATGTTCCTGACCTATTTCGTGATGGAACCCGTTTTTAC CGAAGCATGGGAGACCGGAATCGCACCACTGATCGACGAGGAACTGGAAGTTGTGCCAGCCCTTGAACGCGCTGTCGAAC CTTTCCGAGTCTTCATGGCCAACCGGTTGGATCCAGACACCTACTACGCCATCGCCGATCTGCGCCCAGGCACAGAGGGA AGTGACCCTTCACCTGAATCGCCGCTCTCCGTGTTGATCCCGAGCTTTATGCTTTCCGAGATCACACGCGCATTCGAAAT CGGGTTTCTTGTCTTTCTTCCCTTCTTGGTCATCGATCTCGTGACTGCGGCAATCCTGATGTCGATGGGGATGATGATGG TTCCACCGGCACTGGTTTCCTTGCCTTTCAAACTGGCATTCTTTGTCGTCGCGGACGGTTGGAGCCTGATCGCCAGCGCC CTCGTCAGGAGCTATTACCCCTCATAG Protein sequence : MTRKFLALGVLAVFALLAQPQVALAQELSLNLADGQSISARTIQLILLITVLSVAPGLLVMLTCFPFLITVLSILRQAIG LQQAPPNMLMISLAMFLTYFVMEPVFTEAWETGIAPLIDEELEVVPALERAVEPFRVFMANRLDPDTYYAIADLRPGTEG SDPSPESPLSVLIPSFMLSEITRAFEIGFLVFLPFLVIDLVTAAILMSMGMMMVPPALVSLPFKLAFFVVADGWSLIASA LVRSYYPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 6e-29 | 43 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 4e-30 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 6e-42 | 45 |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-39 | 43 |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 5e-41 | 43 |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 3e-31 | 42 |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 3e-30 | 41 |
| fliP | YP_614938.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-40 | 41 |
